RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 TXNL1O43396 289 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 ZNF735P0CB33 412 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 PF4V1P10720 104 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 SLC25A4P12235 298 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 PTHLHP12272 177 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 MGMTP16455 207 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 FUT3P21217 361 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 CBX5P45973 191 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 OR2F1Q13607 317 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 DIAPH2-AS1Q14236 149 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 PNLIPRP3Q17RR3 467 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 TCTEX1D4Q5JR98 221 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 C9orf152Q5JTZ5 239 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 GSG1LQ6UXU4 331 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 TMUB2Q71RG4 321 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 EIF4E3Q8N5X7 224 aaKnown RBP10.71□□□□□ -0.69
HMGN1-211ENST00000471260 PHYHIPLQ96FC7 376 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 Q96M66 194 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 SELENOIQ9C0D9 397 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 CST11Q9H112 138 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 PFDN2Q9UHV9 154 aa10.71□□□□□ -0.69
HMGN1-211ENST00000471260 PSMB11A5LHX3 300 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 TMEM14DPA8MWL7 114 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 KRBOX1C9JBD0 128 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 I3L521 148 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 CRTAPO75718 401 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-211ENST00000471260 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 CD33P20138 364 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 CD1BP29016 333 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 ZNF137PP52743 207 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 H2BFSP57053 126 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 QRFPP83859 136 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 SLC25A48Q6ZT89 311 aaKnown RBP10.7□□□□□ -0.7
HMGN1-211ENST00000471260 OVCH2Q7RTZ1 564 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 HSD17B13Q7Z5P4 300 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-211ENST00000471260 MOB3BQ86TA1 216 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 SLC25A42Q86VD7 318 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 COMMD1Q8N668 190 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 RBPMSQ93062 196 aaKnown RBP10.7□□□□□ -0.7
HMGN1-211ENST00000471260 ST6GALNAC6Q969X2 333 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 BANF2Q9H503 90 aa10.7□□□□□ -0.7
HMGN1-211ENST00000471260 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.7□□□□□ -0.7
HMGN1-211ENST00000471260 MBNL3Q9NUK0 354 aaKnown RBP10.7□□□□□ -0.7
HMGN1-211ENST00000471260 A0A1W2PPE3 182 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 A0A1W2PRX2 142 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 C12orf77C9JDV5 145 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 RAB27BO00194 218 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 PDCD6O75340 191 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 DUS4LO95620 317 aaKnown RBP10.69□□□□□ -0.7
HMGN1-211ENST00000471260 IGHG2P01859 326 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 PF4P02776 101 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 NAT1P18440 290 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 OXLD1Q5BKU9 147 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 LYG2Q86SG7 212 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 TGIF2LXQ8IUE1 241 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 ARRDC1Q8N5I2 433 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 TMEM104Q8NE00 496 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 OR4D10Q8NGI6 311 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 OR52B4Q8NGK2 314 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 OR2T10Q8NGZ9 312 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 OR4K15Q8NH41 348 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 KCNG3Q8TAE7 436 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 RTN4IP1Q8WWV3 396 aaPredicted RBP10.69□□□□□ -0.7
HMGN1-211ENST00000471260 SCGB3A2Q96PL1 93 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 ARL6Q9H0F7 186 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 SLC25A32Q9H2D1 315 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 IFT46Q9NQC8 304 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 LIN7CQ9NUP9 197 aaKnown RBP10.69□□□□□ -0.7
HMGN1-211ENST00000471260 NECAP2Q9NVZ3 263 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 KCNIP1Q9NZI2 227 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 COMMD9Q9P000 198 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 GNG12Q9UBI6 72 aa10.69□□□□□ -0.7
HMGN1-211ENST00000471260 FXYD6-FXYD2A0A087WZ82 144 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 A0A0B4J2A0 478 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 MFSD2BA6NFX1 497 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 SH2D7A6NKC9 451 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-211ENST00000471260 ARPC5O15511 151 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 CFDP00746 253 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-211ENST00000471260 HBZP02008 142 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 SLC35B1P78383 322 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 HTD2P86397 168 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 DHRS2Q13268 280 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 HNF4GQ14541 408 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 VAX1Q5SQQ9 334 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 SLC35E3Q7Z769 313 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 FOXRED2Q8IWF2 684 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 Q8N6K4 173 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 ZNF439Q8NDP4 499 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 OR13C8Q8NGS7 320 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 OR10R2Q8NGX6 335 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 MITD1Q8WV92 249 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 RCC1LQ96I51 464 aaKnown RBP10.68□□□□□ -0.7
HMGN1-211ENST00000471260 EAF1Q96JC9 268 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-211ENST00000471260 PHB2Q99623 299 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 FXYD6Q9H0Q3 95 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 ZFP57Q9NU63 452 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 SHPKQ9UHJ6 478 aa10.68□□□□□ -0.7
HMGN1-211ENST00000471260 IGHV3-43A0A0B4J1X8 118 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms