RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 NCBP2LA6PVI3 153 aaKnown RBP20.2■□□□□ 0.82
U2AF1-203ENST00000398137 TSPAN15O95858 294 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 IGKV1-16P04430 117 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 IL7P13232 177 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 CNTFRP26992 372 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 RTL8BQ17RB0 113 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 PHLDA2Q53GA4 152 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 HIST2H2BDQ6DRA6 164 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 ZNF66Q6ZN08 573 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 OR4C13Q8NGP0 309 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 TERB2Q8NHR7 220 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 BORCS5Q969J3 196 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 HRASLSQ9HDD0 168 aa20.2■□□□□ 0.82
U2AF1-203ENST00000398137 SH2D7A6NKC9 451 aaPredicted RBP20.19■□□□□ 0.82
U2AF1-203ENST00000398137 M0QZ24 198 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 GPR31O00270 319 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 PEX14O75381 377 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 FAUP35544 74 aaKnown RBP20.19■□□□□ 0.82
U2AF1-203ENST00000398137 F2RL1P55085 397 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 UCP3P55916 312 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 MMDQ15546 238 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 SLC38A6Q8IZM9 456 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 C5orf56Q8N8D9 126 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 MRGPRFQ96AM1 343 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 PRRT1Q99946 306 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 RSRP1Q9BUV0 290 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 PRELID3BQ9Y3B1 194 aa20.19■□□□□ 0.82
U2AF1-203ENST00000398137 FCGR3BO75015 233 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 AMY1AP04745 511 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 RLN1P04808 185 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 DEFA6Q01524 100 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 TAGLNQ01995 201 aaKnown RBP20.18■□□□□ 0.82
U2AF1-203ENST00000398137 CBX3Q13185 183 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 LPCAT3Q6P1A2 487 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 OR51H1Q8NH63 302 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 RANBP3Q9H6Z4 567 aaPredicted RBP20.18■□□□□ 0.82
U2AF1-203ENST00000398137 PLSCR3Q9NRY6 295 aa20.18■□□□□ 0.82
U2AF1-203ENST00000398137 LINC00854A0A1B0GVQ3 168 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 M0QZK8 103 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 CRYZL1O95825 349 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 PI3P19957 117 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 BLCAPP62952 87 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 ABCA11PQ4W5N1 156 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 IDO2Q6ZQW0 420 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 CMTM1Q8IZ96 169 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 Q8N9W7 124 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 OR8H1Q8NGG4 311 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 OR13C8Q8NGS7 320 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 MARCH1Q8TCQ1 289 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 FLYWCH2Q96CP2 140 aaKnown RBP20.17■□□□□ 0.82
U2AF1-203ENST00000398137 WDR12Q9GZL7 423 aaKnown RBP20.17■□□□□ 0.82
U2AF1-203ENST00000398137 ZNF702PQ9H963 129 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 SLC2A8Q9NY64 477 aa20.17■□□□□ 0.82
U2AF1-203ENST00000398137 PRKDCP78527 4128 aaKnown RBP20.17■□□□□ 0.82
U2AF1-203ENST00000398137 TET2Q6N021 2002 aaPredicted RBP20.16■□□□□ 0.82
U2AF1-203ENST00000398137 NBR2O15453 112 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 FGF16O43320 207 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 PGLYRP1O75594 196 aaPredicted RBP20.16■□□□□ 0.82
U2AF1-203ENST00000398137 RRASP10301 218 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 RPS16P62249 146 aaKnown RBP20.16■□□□□ 0.82
U2AF1-203ENST00000398137 CATR1Q13166 79 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 ZNF846Q147U1 533 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 C11orf88Q6PI97 169 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 Q6ZS46 218 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 CCDC32Q9BV29 185 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 SCP2D1Q9UJQ7 156 aa20.16■□□□□ 0.82
U2AF1-203ENST00000398137 C9orf152Q5JTZ5 239 aa20.15■□□□□ 0.82
U2AF1-203ENST00000398137 DEDD2Q8WXF8 326 aa20.15■□□□□ 0.82
U2AF1-203ENST00000398137 HARBI1Q96MB7 349 aa20.15■□□□□ 0.82
U2AF1-203ENST00000398137 PRSS22Q9GZN4 317 aa20.15■□□□□ 0.82
U2AF1-203ENST00000398137 S100GP29377 79 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 TMEM177Q53S58 311 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 FAM71E2Q8N5Q1 922 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 NPBQ8NG41 125 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 OR4S2Q8NH73 311 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 TSNAXQ99598 290 aaKnown RBP20.14■□□□□ 0.81
U2AF1-203ENST00000398137 SLC2A9Q9NRM0 540 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 KIAA1456Q9P272 454 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 NOTCH1P46531 2555 aa20.14■□□□□ 0.81
U2AF1-203ENST00000398137 SHOXO15266 292 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 NDUFA3O95167 84 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 CD40LGP29965 261 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 ECI1P42126 302 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 KIR2DS2P43631 304 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 BRWD1-AS2P59051 145 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 SPAG16Q8N0X2 631 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 ZFAND1Q8TCF1 268 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 RNF5Q99942 180 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 RASL11BQ9BPW5 248 aa20.13■□□□□ 0.81
U2AF1-203ENST00000398137 RRHO14718 337 aa20.12■□□□□ 0.81
U2AF1-203ENST00000398137 RAMP3O60896 148 aa20.12■□□□□ 0.81
U2AF1-203ENST00000398137 TMEM95Q3KNT9 176 aa20.12■□□□□ 0.81
U2AF1-203ENST00000398137 PDLIM3Q53GG5 364 aaPredicted RBP20.12■□□□□ 0.81
U2AF1-203ENST00000398137 ARSJQ5FYB0 599 aaPredicted RBP20.12■□□□□ 0.81
U2AF1-203ENST00000398137 TBC1D26Q86UD7 250 aa20.12■□□□□ 0.81
U2AF1-203ENST00000398137 Q8N2B8 174 aa20.12■□□□□ 0.81
U2AF1-203ENST00000398137 OR2T6Q8NHC8 308 aa20.12■□□□□ 0.81
U2AF1-203ENST00000398137 ZNF486Q96H40 463 aaPredicted RBP20.12■□□□□ 0.81
U2AF1-203ENST00000398137 FBXL15Q9H469 300 aa20.12■□□□□ 0.81
U2AF1-203ENST00000398137 LIN7CQ9NUP9 197 aaKnown RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms