RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 BCL2P10415 239 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 SELLP14151 372 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 MAS1LP35410 378 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 RPL39P5Q59GN2 51 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 SSX7Q7RTT5 188 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 ASCL5Q7RTU5 278 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 CISD2Q8N5K1 135 aaKnown RBP13.88□□□□□ -0.19
NUP50-202ENST00000396096 CYB561D1Q8N8Q1 229 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 CORO2AQ92828 525 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 DIRC2Q96SL1 478 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 QTRT1Q9BXR0 403 aaKnown RBP13.88□□□□□ -0.19
NUP50-202ENST00000396096 ZNF665Q9H7R5 613 aa13.88□□□□□ -0.19
NUP50-202ENST00000396096 PUS1Q9Y606 427 aaKnown RBP eCLIP13.88□□□□□ -0.19
NUP50-202ENST00000396096 TRGV10A0A0A0MS01 117 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 GNG13Q9P2W3 67 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 MUC6Q6W4X9 2439 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 HCFC1P51610 2035 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 ZNF729A6NN14 1252 aaPredicted RBP13.87□□□□□ -0.19
NUP50-202ENST00000396096 C15orf62A8K5M9 175 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 SLC31A2O15432 143 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 RBMXL2O75526 392 aaKnown RBP13.87□□□□□ -0.19
NUP50-202ENST00000396096 CYB5R3P00387 301 aaPredicted RBP13.87□□□□□ -0.19
NUP50-202ENST00000396096 MBP02144 154 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 SPCS3P61009 180 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 TBR1Q16650 682 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 CT45A1Q5HYN5 189 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 LCN15Q6UWW0 184 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 GFRALQ6UXV0 394 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 TCF23Q7RTU1 214 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 ZNF429Q86V71 674 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 SPACA3Q8IXA5 215 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 CT45A3Q8NHU0 189 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 PLPPR2Q96GM1 343 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 S1PR3Q99500 378 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 P2RX4Q99571 388 aa13.87□□□□□ -0.19
NUP50-202ENST00000396096 DYSFO75923 2080 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 A0A087WWC5 75 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 MAP1LC3B2A6NCE7 125 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 DPRXA6NFQ7 191 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 ARG1P05089 322 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 THBDP07204 575 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 DAOP14920 347 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 NQO2P16083 231 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 ERVK-16P61578 105 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 PRAMEF5Q5TYX0 476 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 DUX4L9Q6RFH8 374 aaPredicted RBP13.86□□□□□ -0.19
NUP50-202ENST00000396096 SLC35E3Q7Z769 313 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 ZNF439Q8NDP4 499 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 YPEL4Q96NS1 127 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 MAP1LC3BQ9GZQ8 125 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 BIN3Q9NQY0 253 aa13.86□□□□□ -0.19
NUP50-202ENST00000396096 ASPMQ8IZT6 3477 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 A0A1W2PPH5 198 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 IGKV1D-33P01593 117 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 IGKV1-33P01594 117 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 FBP1P09467 338 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 IRF2P14316 349 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 FGF7P21781 194 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 ELLP55199 621 aaPredicted RBP13.85□□□□□ -0.19
NUP50-202ENST00000396096 ADIPOQQ15848 244 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 ACSM6Q6P461 480 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 RPP25LQ8N5L8 163 aaKnown RBP13.85□□□□□ -0.19
NUP50-202ENST00000396096 OR4S2Q8NH73 311 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 RAB39BQ96DA2 213 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 TVP23CQ96ET8 276 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 SAV1Q9H4B6 383 aaPredicted RBP13.85□□□□□ -0.19
NUP50-202ENST00000396096 IDI2-AS1Q9NZ38 188 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 PLCE1Q9P212 2302 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 CFAP47Q6ZTR5 3102 aa13.85□□□□□ -0.19
NUP50-202ENST00000396096 IFNA1P01562 189 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 TNFRSF1AP19438 455 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 THBS3P49746 956 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 RAB5BP61020 215 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 RPP30P78346 268 aaKnown RBP13.84□□□□□ -0.19
NUP50-202ENST00000396096 RELBQ01201 579 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 HABP2Q14520 560 aaPredicted RBP13.84□□□□□ -0.19
NUP50-202ENST00000396096 UTF1Q5T230 341 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 C1orf229Q6ZS94 237 aaPredicted RBP13.84□□□□□ -0.19
NUP50-202ENST00000396096 WFDC8Q8IUA0 241 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 OR4A16Q8NH70 328 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 MALSU1Q96EH3 234 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 ADTRPQ96IZ2 230 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 CCL13Q99616 98 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 ZNF251Q9BRH9 671 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 NIPSNAP3BQ9BS92 247 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 DOCK11Q5JSL3 2073 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 A0A1W2PPE2 198 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 C17orf100A8MU93 164 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 K7ENP7 123 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 NDUFS6O75380 124 aaKnown RBP13.84□□□□□ -0.19
NUP50-202ENST00000396096 GYPAP02724 150 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 VDAC2P45880 294 aaPredicted RBP13.84□□□□□ -0.19
NUP50-202ENST00000396096 FGF8P55075 233 aaPredicted RBP13.84□□□□□ -0.19
NUP50-202ENST00000396096 OR2B8PP59922 312 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 FAM90A2PQ658T7 463 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 CA5BP1Q8WTZ4 195 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 ISOC2Q96AB3 205 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 NPCDR1Q9BY65 106 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 SLC39A9Q9NUM3 307 aa13.84□□□□□ -0.19
NUP50-202ENST00000396096 VAX2Q9UIW0 290 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms