RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 DRAM1Q8N682 238 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 MIOXQ9UGB7 285 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 NAGKQ9UJ70 344 aa13.12□□□□□ -0.31
TIMP3-201ENST00000266085 IGKV3-7A0A075B6H7 116 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 HYPMO75409 117 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 RBKSQ9H477 322 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 LYRM2Q9NU23 88 aaPredicted RBP13.11□□□□□ -0.31
TIMP3-201ENST00000266085 YTHDF2Q9Y5A9 579 aaKnown RBP13.11□□□□□ -0.31
TIMP3-201ENST00000266085 OR2J3O76001 311 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 TCL1AP56279 114 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 KLHDC1Q8N7A1 406 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 OR11H4Q8NGC9 324 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 METTL1Q9UBP6 276 aaKnown RBP13.11□□□□□ -0.31
TIMP3-201ENST00000266085 C19orf67A6NJJ6 358 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 PRR32B1ATL7 298 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 FAM106CPP0CH98 169 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 ABHD12Q8N2K0 398 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 OR52M1Q8NGK5 317 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 OR10D4PQ8NGN7 298 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 OR1L6Q8NGR2 347 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 PRSS3P2Q8NHM4 247 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 STARD4Q96DR4 205 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 OR2A4O95047 310 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 BCL2P10415 239 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 TNFRSF9Q07011 255 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 COX19Q49B96 90 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 FAM201AQ5SY85 155 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 OR2A7Q96R45 310 aa13.11□□□□□ -0.31
TIMP3-201ENST00000266085 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 HKR1P10072 659 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 WNT5AP41221 380 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 BSPH1Q075Z2 132 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 HCP5Q6MZN7 132 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 RNASEKQ6P5S7 137 aaKnown RBP13.1□□□□□ -0.31
TIMP3-201ENST00000266085 TAF15Q92804 592 aaKnown RBP eCLIP13.1□□□□□ -0.314e-8■■■■□ 26.5
TIMP3-201ENST00000266085 LURAP1Q96LR2 239 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 SRCAPQ6ZRS2 3230 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 A0A087WV48 116 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 P01737 135 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 OR4C12Q96R67 309 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 PHF3Q92576 2039 aaKnown RBP13.1□□□□□ -0.31
TIMP3-201ENST00000266085 F5H697 171 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 S1PR2O95136 353 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 TMEM187Q14656 261 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 IZUMO4Q1ZYL8 232 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 NR2C2APQ86WQ0 139 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 NRIP2Q9BQI9 281 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 SPRR3Q9UBC9 169 aa13.1□□□□□ -0.31
TIMP3-201ENST00000266085 LINC00869P0C866 280 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 IGFBP3P17936 291 aaPredicted RBP13.09□□□□□ -0.31
TIMP3-201ENST00000266085 USF1P22415 310 aaPredicted RBP13.09□□□□□ -0.31
TIMP3-201ENST00000266085 OR4C13Q8NGP0 309 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 LSM10Q969L4 123 aaKnown RBP13.09□□□□□ -0.31
TIMP3-201ENST00000266085 IGSF23A1L1A6 192 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 FAM74A7A6NL05 159 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 RANP62826 216 aaKnown RBP13.09□□□□□ -0.31
TIMP3-201ENST00000266085 TUSC1Q2TAM9 212 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 Q5BKY6 102 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 ACP7Q6ZNF0 438 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 TMEM186Q96B77 213 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 SRD5A3Q9H8P0 318 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 CFDP00746 253 aaPredicted RBP13.09□□□□□ -0.31
TIMP3-201ENST00000266085 RD3LP0DJH9 198 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 ZNF880Q6PDB4 577 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 PAXXQ9BUH6 204 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 CHODLQ9H9P2 273 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 RALYQ9UKM9 306 aaKnown RBP13.09□□□□□ -0.31
TIMP3-201ENST00000266085 SRSF10O75494 262 aaKnown RBP13.09□□□□□ -0.31
TIMP3-201ENST00000266085 LIPFP07098 398 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 NHLRC2Q8NBF2 726 aa13.09□□□□□ -0.31
TIMP3-201ENST00000266085 C12orf77C9JDV5 145 aa13.08□□□□□ -0.31
TIMP3-201ENST00000266085 ZIC4Q8N9L1 334 aa13.08□□□□□ -0.31
TIMP3-201ENST00000266085 C5orf17Q8NAS9 161 aa13.08□□□□□ -0.31
TIMP3-201ENST00000266085 WBP1Q96G27 269 aa13.08□□□□□ -0.31
TIMP3-201ENST00000266085 HIGD1AQ9Y241 93 aa13.08□□□□□ -0.31
TIMP3-201ENST00000266085 TCF19Q9Y242 345 aa13.08□□□□□ -0.31
TIMP3-201ENST00000266085 KBTBD11O94819 623 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 GFRA1P56159 465 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 Q0VFX4 171 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 FAM216AQ8WUB2 273 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 TMEM106BQ9NUM4 274 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 ZG16O60844 167 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 FOXG1P55316 489 aaPredicted RBP13.08□□□□□ -0.32
TIMP3-201ENST00000266085 TOMM20LQ6UXN7 152 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 TP53RKQ96S44 253 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 GOLT1BQ9Y3E0 138 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 CRISP2P16562 243 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 CYB561D1Q8N8Q1 229 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 POC1AQ8NBT0 407 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 OR4A5Q8NH83 315 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 MS4A10Q96PG2 267 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 CLEC7AQ9BXN2 247 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 ZNF319Q9P2F9 582 aa13.08□□□□□ -0.32
TIMP3-201ENST00000266085 ATRXP46100 2492 aa13.07□□□□□ -0.32
TIMP3-201ENST00000266085 SS18L1O75177 396 aaPredicted RBP13.07□□□□□ -0.32
TIMP3-201ENST00000266085 EFNB1P98172 346 aa13.07□□□□□ -0.32
TIMP3-201ENST00000266085 IQCJQ1A5X6 159 aa13.07□□□□□ -0.32
TIMP3-201ENST00000266085 AURKAIP1Q9NWT8 199 aaPredicted RBP13.07□□□□□ -0.32
TIMP3-201ENST00000266085 PTPRDP23468 1912 aa13.07□□□□□ -0.32
TIMP3-201ENST00000266085 ZNF253O75346 499 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms