RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 RNASEH2CQ8TDP1 164 aaKnown RBP14.25□□□□□ -0.13
FOXA1-201ENST00000250448 IGKV1D-33P01593 117 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 IGKV1-33P01594 117 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 CRYABP02511 175 aaKnown RBP14.25□□□□□ -0.13
FOXA1-201ENST00000250448 TUBG1P23258 451 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 BSXQ3C1V8 233 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 TMEM95Q3KNT9 176 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 SAPCD1Q5SSQ6 148 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 TGIF2LYQ8IUE0 185 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 GP6Q9HCN6 339 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 CHTOPQ9Y3Y2 248 aaKnown RBP14.25□□□□□ -0.13
FOXA1-201ENST00000250448 RBM7Q9Y580 266 aaKnown RBP14.25□□□□□ -0.13
FOXA1-201ENST00000250448 TIMM9Q9Y5J7 89 aa14.25□□□□□ -0.13
FOXA1-201ENST00000250448 OR5B21A6NL26 309 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 ANKRD30BLA7E2S9 258 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 FGF7P21781 194 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 RPL23P62829 140 aaKnown RBP14.24□□□□□ -0.13
FOXA1-201ENST00000250448 GNG3P63215 75 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 RPP25LQ8N5L8 163 aaKnown RBP14.24□□□□□ -0.13
FOXA1-201ENST00000250448 RPUSD4Q96CM3 377 aaKnown RBP14.24□□□□□ -0.13
FOXA1-201ENST00000250448 H7BYZ3 331 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 LILRA1O75019 489 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 TNFSF13O75888 250 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 AGFG2O95081 481 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 TMPRSS3P57727 454 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 MOB1BQ7L9L4 216 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 MARCH11A6NNE9 402 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 GALR1P47211 349 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 ERVS71-1P61550 626 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 OR8G2PQ6IF36 304 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 ETFRF1Q6IPR1 90 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 POM121L2Q96KW2 1035 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 OR5B12Q96R08 314 aa14.24□□□□□ -0.13
FOXA1-201ENST00000250448 GZMBP10144 247 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 IDH3GP51553 393 aaPredicted RBP14.23□□□□□ -0.13
FOXA1-201ENST00000250448 PLP2Q04941 152 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 COA6Q5JTJ3 125 aaKnown RBP14.23□□□□□ -0.13
FOXA1-201ENST00000250448 SPATA46Q5T0L3 261 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 ACSM6Q6P461 480 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 TMEM14EPQ6UXP3 125 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 OR51G1Q8NGK1 321 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 STARD4Q96DR4 205 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 SLC25A22Q9H936 323 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 MPC1Q9Y5U8 109 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 FAM90A26D6RGX4 464 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 TMEM250H0YL14 139 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 GZMHP20718 246 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 ARR3P36575 388 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 PSMB3P49720 205 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 TLE1Q04724 770 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 Q6P435 159 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 Q6ZT83 130 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 PKIBQ9C010 78 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 ADGRG4Q8IZF6 3080 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 ESPL1Q14674 2120 aa14.23□□□□□ -0.13
FOXA1-201ENST00000250448 XKRY2A2RUG3 117 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 PPP5D1E7EU14 171 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 WDR1O75083 606 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 RHBDL1O75783 438 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 CLDN1O95832 211 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 P2RY6Q15077 328 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 C1orf185Q5T7R7 199 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 UBALD1Q8TB05 177 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 PARLQ9H300 379 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 ITPR1Q14643 2758 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 CTXND1A0A1B0GTU2 59 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 HMGB3O15347 200 aaKnown RBP14.22□□□□□ -0.13
FOXA1-201ENST00000250448 PLA2G5P39877 138 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 WNT5AP41221 380 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 HNF4GQ14541 408 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 CENPVQ7Z7K6 275 aaPredicted RBP14.22□□□□□ -0.13
FOXA1-201ENST00000250448 CXorf67Q86X51 503 aaPredicted RBP14.22□□□□□ -0.13
FOXA1-201ENST00000250448 RAB24Q969Q5 203 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 ELOVL1Q9BW60 279 aa14.22□□□□□ -0.13
FOXA1-201ENST00000250448 ACTR3CQ9C0K3 210 aaPredicted RBP14.22□□□□□ -0.13
FOXA1-201ENST00000250448 HRASP01112 189 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 GABRA6Q16445 453 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 SNRNP40Q96DI7 357 aaKnown RBP14.21□□□□□ -0.13
FOXA1-201ENST00000250448 CACNA1AO00555 2505 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 J3QT63 122 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 SIRPB1O00241 398 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 APLNRP35414 380 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 UBE2NP61088 152 aaKnown RBP14.21□□□□□ -0.13
FOXA1-201ENST00000250448 ZNF66Q6ZN08 573 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 DRAM1Q8N682 238 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 OR51I2Q9H344 312 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 TRAPPC2LQ9UL33 140 aa14.21□□□□□ -0.13
FOXA1-201ENST00000250448 CADP27708 2225 aa14.21□□□□□ -0.14
FOXA1-201ENST00000250448 MBD3L4A6NDZ8 208 aaPredicted RBP14.2□□□□□ -0.14
FOXA1-201ENST00000250448 MBD3L3A6NE82 208 aaPredicted RBP14.2□□□□□ -0.14
FOXA1-201ENST00000250448 MBD3L5A6NJ08 208 aaPredicted RBP14.2□□□□□ -0.14
FOXA1-201ENST00000250448 TGFBR3Q03167 851 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 TNFRSF9Q07011 255 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 IGFBP7Q16270 282 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 MBD3L2Q8NHZ7 208 aaPredicted RBP14.2□□□□□ -0.14
FOXA1-201ENST00000250448 TMEM170AQ8WVE7 144 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 PCGF1Q9BSM1 259 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 PROCRQ9UNN8 238 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 COL6A6A6NMZ7 2263 aa14.2□□□□□ -0.14
FOXA1-201ENST00000250448 FAM3BP58499 235 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms