RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, humanhuman

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-222ENST00000638959 ACSM3Q53FZ2 586 aa-2.34□□□□□ -2.78
LMBR1-222ENST00000638959 ELMO1Q92556 727 aa-2.34□□□□□ -2.78
LMBR1-222ENST00000638959 MED18Q9BUE0 208 aa-2.34□□□□□ -2.78
LMBR1-222ENST00000638959 NKX6-2Q9C056 277 aaPredicted RBP-2.34□□□□□ -2.78
LMBR1-222ENST00000638959 SCN3AQ9NY46 2000 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 TRBV11-1A0A0K0K1C0 115 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 POLR3GO15318 223 aaPredicted RBP-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 STMN1P16949 149 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 OPRM1P35372 400 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 CLDN18P56856 261 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 ZNF619Q8N2I2 560 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 OR13C8Q8NGS7 320 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 C8orf44Q96CB5 159 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 LIN28AQ9H9Z2 209 aaKnown RBP-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 TAS2R4Q9NYW5 299 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 CFL2Q9Y281 166 aa-2.35□□□□□ -2.79
LMBR1-222ENST00000638959 DOPEY2Q9Y3R5 2298 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 CCDC160A6NGH7 325 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 ZNF736B4DX44 427 aaPredicted RBP-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 FAAHO00519 579 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 LSM1O15116 133 aaKnown RBP-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 PDCD6O75340 191 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 FCN3O75636 299 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 OR5F1O95221 314 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 ASAH2BP0C7U1 165 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 CD86P42081 329 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 AP1S1P61966 158 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 RPL23AP62750 156 aaKnown RBP-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 DMTNQ08495 405 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 NBPF5PQ86XG9 351 aaPredicted RBP-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 UBE2J2Q8N2K1 259 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 DAND5Q8N907 189 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 OR52E5Q8NH55 327 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 SLC38A4Q969I6 547 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 ERMAPQ96PL5 475 aaPredicted RBP-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 EBPLQ9BY08 206 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 DNAJC12Q9UKB3 198 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 TNFSF18Q9UNG2 199 aa-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 PHRF1Q9P1Y6 1649 aaKnown RBP-2.36□□□□□ -2.79
LMBR1-222ENST00000638959 PIEZO2Q9H5I5 2752 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 TTC21AQ8NDW8 1320 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 TRBV10-2A0A0K0K1G8 114 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 GMFGO60234 142 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 MTX2O75431 263 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 SFTPCP11686 197 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 CDK2P24941 298 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ATP6V1E1P36543 226 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ACAA2P42765 397 aaKnown RBP-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ACTBP60709 375 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ACTG1P63261 375 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 FBXO36Q8NEA4 188 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ACOT12Q8WYK0 555 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 PSMF1Q92530 271 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ITFG2Q969R8 447 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ZNF396Q96N95 335 aaPredicted RBP-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 ANP32EQ9BTT0 268 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 GTSF1LQ9H1H1 148 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 XPNPEP1Q9NQW7 623 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 CSMD3Q7Z407 3707 aa-2.37□□□□□ -2.79
LMBR1-222ENST00000638959 RYR1P21817 5038 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 ODAMA1E959 279 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 TRIM64CA6NLI5 447 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 H3BN98 237 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 STK16O75716 305 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 CLDN6P56747 220 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 YWHAEP62258 255 aaKnown RBP-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 RBM3P98179 157 aaKnown RBP-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 TBC1D28Q2M2D7 210 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 LINC01554Q52M75 96 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 CDKL4Q5MAI5 379 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 GAPTQ8N292 157 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 OR51H1Q8NH63 302 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 SLC50A1Q9BRV3 221 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 NAA50Q9GZZ1 169 aaKnown RBP-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 LYARQ9NX58 379 aaKnown RBP-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 REREQ9P2R6 1566 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 POLR3HQ9Y535 204 aaPredicted RBP-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 SVEP1Q4LDE5 3571 aa-2.38□□□□□ -2.79
LMBR1-222ENST00000638959 DOPEY1Q5JWR5 2465 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 PSMD11O00231 422 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 SLC2A3P11169 496 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 ORM2P19652 201 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 ACTR1BP42025 376 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 MAGEA2P43356 314 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 SPAG1Q07617 926 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 FAM74A1Q5RGS3 127 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 AAED1Q7RTV5 226 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 PHF13Q86YI8 300 aaPredicted RBP-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 PACRGLQ8N7B6 248 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 CCDC112Q8NEF3 446 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 OR8G5Q8NG78 346 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 OR2D3Q8NGH3 330 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 SFRP2Q96HF1 295 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 C20orf24Q9BUV8 137 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 DIABLOQ9NR28 239 aa-2.39□□□□□ -2.79
LMBR1-222ENST00000638959 SIPA1L1O43166 1804 aa-2.4□□□□□ -2.79
LMBR1-222ENST00000638959 HEATR5AQ86XA9 2040 aa-2.4□□□□□ -2.79
LMBR1-222ENST00000638959 FAM183AA6NL82 134 aa-2.4□□□□□ -2.79
LMBR1-222ENST00000638959 I3L4J1 428 aa-2.4□□□□□ -2.79
LMBR1-222ENST00000638959 ZNF701M0R085 212 aaPredicted RBP-2.4□□□□□ -2.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms