RNA–Protein interactions for RNA: ENST00000611736.5

VEGFA-226, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-226ENST00000611736 CMTM3Q96MX0 182 aa20.48■□□□□ 0.87
VEGFA-226ENST00000611736 MRPS7Q9Y2R9 242 aaKnown RBP20.48■□□□□ 0.87
VEGFA-226ENST00000611736 MEGF8Q7Z7M0 2845 aa20.48■□□□□ 0.87
VEGFA-226ENST00000611736 IGKV1D-13A0A0B4J2D9 117 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 IGKV1-13P0DP09 117 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 ZNF182P17025 639 aaPredicted RBP20.47■□□□□ 0.87
VEGFA-226ENST00000611736 ELK1P19419 428 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 THBS3P49746 956 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 SPCS2Q15005 226 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 ZNF645Q8N7E2 425 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 OR4F17Q8NGA8 305 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 FLYWCH2Q96CP2 140 aaKnown RBP20.47■□□□□ 0.87
VEGFA-226ENST00000611736 OR4F4Q96R69 305 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 TSNAXQ99598 290 aaKnown RBP20.47■□□□□ 0.87
VEGFA-226ENST00000611736 RNF5Q99942 180 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 PARP11Q9NR21 331 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 NECAP2Q9NVZ3 263 aa20.47■□□□□ 0.87
VEGFA-226ENST00000611736 IGHV7-81A0A0B4J1V7 117 aa20.46■□□□□ 0.87
VEGFA-226ENST00000611736 SMIM31A0A1B0GVY4 71 aa20.46■□□□□ 0.87
VEGFA-226ENST00000611736 TUSC2O75896 110 aa20.46■□□□□ 0.87
VEGFA-226ENST00000611736 FCGR2CP31995 323 aa20.46■□□□□ 0.87
VEGFA-226ENST00000611736 RPL5P46777 297 aaKnown RBP20.46■□□□□ 0.87
VEGFA-226ENST00000611736 BVESQ8NE79 360 aa20.46■□□□□ 0.87
VEGFA-226ENST00000611736 GON7Q9BXV9 100 aa20.46■□□□□ 0.87
VEGFA-226ENST00000611736 OR51J1Q9H342 316 aa20.46■□□□□ 0.87
VEGFA-226ENST00000611736 METTL1Q9UBP6 276 aaKnown RBP20.46■□□□□ 0.87
VEGFA-226ENST00000611736 FAM25AB3EWG3 89 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 FAM25CB3EWG5 89 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 FAM25GB3EWG6 89 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 ATP6V0E1O15342 81 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 VDAC1P21796 283 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 DUTP33316 252 aaKnown RBP20.45■□□□□ 0.86
VEGFA-226ENST00000611736 PRSS3P35030 304 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 PSG5Q15238 335 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 COMMD1Q8N668 190 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 RAB2BQ8WUD1 216 aa20.45■□□□□ 0.86
VEGFA-226ENST00000611736 LINC00473A8K010 186 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 IGF1P05019 195 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 OR5H8P0DN80 308 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 PF4V1P10720 104 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 AADACP22760 399 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 CBX3Q13185 183 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 RTL8BQ17RB0 113 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 TEX38Q6PEX7 206 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 SNX29P2Q8IUI4 249 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 OR5AP2Q8NGF4 316 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 ADTRPQ96IZ2 230 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 CLCC1Q96S66 551 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 RBMX2Q9Y388 322 aaKnown RBP20.44■□□□□ 0.86
VEGFA-226ENST00000611736 WSB1Q9Y6I7 421 aa20.44■□□□□ 0.86
VEGFA-226ENST00000611736 FCN1O00602 326 aa20.43■□□□□ 0.86
VEGFA-226ENST00000611736 SLC25A17O43808 307 aa20.43■□□□□ 0.86
VEGFA-226ENST00000611736 SPDEFO95238 335 aa20.43■□□□□ 0.86
VEGFA-226ENST00000611736 NDPQ00604 133 aa20.43■□□□□ 0.86
VEGFA-226ENST00000611736 TAGLNQ01995 201 aaKnown RBP20.43■□□□□ 0.86
VEGFA-226ENST00000611736 CDK10Q15131 360 aa20.43■□□□□ 0.86
VEGFA-226ENST00000611736 HARBI1Q96MB7 349 aa20.43■□□□□ 0.86
VEGFA-226ENST00000611736 G3V318 75 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 SLC22A5O76082 557 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 IGLV2-14P01704 120 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 TMBIM6P55061 237 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 RPL23AP62750 156 aaKnown RBP20.42■□□□□ 0.86
VEGFA-226ENST00000611736 CFHR3Q02985 330 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 LCNL1Q6ZST4 164 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 ABHD5Q8WTS1 349 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 SECTM1Q8WVN6 248 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 DDB2Q92466 427 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 TPSG1Q9NRR2 321 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 ANAPC10Q9UM13 185 aa20.42■□□□□ 0.86
VEGFA-226ENST00000611736 SHOXO15266 292 aa20.41■□□□□ 0.86
VEGFA-226ENST00000611736 NOL3O60936 208 aaKnown RBP20.41■□□□□ 0.86
VEGFA-226ENST00000611736 RRASP10301 218 aa20.41■□□□□ 0.86
VEGFA-226ENST00000611736 CX3CL1P78423 397 aa20.41■□□□□ 0.86
VEGFA-226ENST00000611736 EHFQ9NZC4 300 aa20.41■□□□□ 0.86
VEGFA-226ENST00000611736 ZNF580Q9UK33 172 aa20.41■□□□□ 0.86
VEGFA-226ENST00000611736 CRYZL1O95825 349 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 PPYP01298 95 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 IGLV2-23P01705 113 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 PMP2P02689 132 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 RPLP1P05386 114 aaKnown RBP20.4■□□□□ 0.86
VEGFA-226ENST00000611736 FXYD4P59646 89 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 FOXE3Q13461 319 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 TMEM177Q53S58 311 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 OR2B11Q5JQS5 317 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 CXorf66Q5JRM2 361 aaPredicted RBP20.4■□□□□ 0.86
VEGFA-226ENST00000611736 ZNF660Q6AZW8 331 aaPredicted RBP20.4■□□□□ 0.86
VEGFA-226ENST00000611736 C18orf65Q6ZTR6 163 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 KCTD9Q7L273 389 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 GPX8Q8TED1 209 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 BCL7BQ9BQE9 202 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 SCOCQ9UIL1 159 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 FBXO7Q9Y3I1 522 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 A3GALT2U3KPV4 340 aa20.4■□□□□ 0.86
VEGFA-226ENST00000611736 TRAV41A0A0B4J266 112 aa20.39■□□□□ 0.85
VEGFA-226ENST00000611736 NUDT19A8MXV4 375 aa20.39■□□□□ 0.85
VEGFA-226ENST00000611736 CA2P00918 260 aa20.39■□□□□ 0.85
VEGFA-226ENST00000611736 NAT1P18440 290 aa20.39■□□□□ 0.85
VEGFA-226ENST00000611736 LGALS7P47929 136 aa20.39■□□□□ 0.85
VEGFA-226ENST00000611736 RFX2P48378 723 aa20.39■□□□□ 0.85
VEGFA-226ENST00000611736 RPL30P62888 115 aaKnown RBP20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms