RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 LINC01548A6NM66 108 aa17.59■□□□□ 0.41
SF1-220ENST00000626028 H0YJW9 148 aa17.59■□□□□ 0.41
SF1-220ENST00000626028 RPL23AP62750 156 aaKnown RBP17.59■□□□□ 0.41
SF1-220ENST00000626028 FOXE3Q13461 319 aa17.59■□□□□ 0.41
SF1-220ENST00000626028 C5orf64Q2M2E5 130 aa17.59■□□□□ 0.41
SF1-220ENST00000626028 KHDC1LQ5JSQ8 128 aa17.59■□□□□ 0.41
SF1-220ENST00000626028 A0A075B6Q4 140 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 SMIM30A4D0T7 59 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 PF4P02776 101 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 ELANEP08246 267 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 VDAC1P21796 283 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 CDNFQ49AH0 187 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 LIN54Q6MZP7 749 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 FAM131AQ6UXB0 335 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 LGALS14Q8TCE9 139 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 HSPB9Q9BQS6 159 aa17.58■□□□□ 0.4
SF1-220ENST00000626028 BET1O15155 118 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 DUS4LO95620 317 aaKnown RBP17.57■□□□□ 0.4
SF1-220ENST00000626028 IGHG4P01861 327 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 CTXN2P0C2S0 81 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 GSTT2P0CG29 244 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 GSTT2BP0CG30 244 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 CD33P20138 364 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 TAGLNQ01995 201 aaKnown RBP17.57■□□□□ 0.4
SF1-220ENST00000626028 CFHR3Q02985 330 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 BEAN1Q3B7T3 259 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 IGSF11Q5DX21 431 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 CXorf66Q5JRM2 361 aaPredicted RBP17.57■□□□□ 0.4
SF1-220ENST00000626028 RHBDL2Q9NX52 303 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 LINC00527Q9UJ94 153 aa17.57■□□□□ 0.4
SF1-220ENST00000626028 G3V4G9 280 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 H7C2Y5 167 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 PROP1O75360 226 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 TFAP2AP05549 437 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 SNRPBP14678 240 aaKnown RBP17.56■□□□□ 0.4
SF1-220ENST00000626028 PDPNQ86YL7 162 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 RITA1Q96K30 269 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 GINS4Q9BRT9 223 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 OR51J1Q9H342 316 aa17.56■□□□□ 0.4
SF1-220ENST00000626028 ZNF230Q9UIE0 474 aaPredicted RBP17.56■□□□□ 0.4
SF1-220ENST00000626028 TRIM64CA6NLI5 447 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 RRHO14718 337 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 SPDEFO95238 335 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 APOA2P02652 100 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 MXD1Q05195 221 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 ZNF260Q3ZCT1 412 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 ZNF660Q6AZW8 331 aaPredicted RBP17.55■□□□□ 0.4
SF1-220ENST00000626028 REC114Q7Z4M0 266 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 RCC1LQ96I51 464 aaKnown RBP17.55■□□□□ 0.4
SF1-220ENST00000626028 RNF150Q9ULK6 438 aa17.55■□□□□ 0.4
SF1-220ENST00000626028 IGHV7-81A0A0B4J1V7 117 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 AIREO43918 545 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 CDX1P47902 265 aaPredicted RBP17.54■□□□□ 0.4
SF1-220ENST00000626028 IDNKQ5T6J7 187 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 ZNF695Q8IW36 515 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 H1FOOQ8IZA3 346 aaPredicted RBP17.54■□□□□ 0.4
SF1-220ENST00000626028 YIPF6Q96EC8 236 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 TSNAXQ99598 290 aaKnown RBP17.54■□□□□ 0.4
SF1-220ENST00000626028 OR2D2Q9H210 308 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 RNF167Q9H6Y7 350 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 SPATA2Q9UM82 520 aa17.54■□□□□ 0.4
SF1-220ENST00000626028 CLEC2LP0C7M8 214 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 OR8U9P0C7N5 309 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 CNTFRP26992 372 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 PSMB8P28062 276 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 THBS3P49746 956 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 CRIP2P52943 208 aaPredicted RBP17.53■□□□□ 0.4
SF1-220ENST00000626028 GNG2P59768 71 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 GLDNQ6ZMI3 551 aaPredicted RBP17.53■□□□□ 0.4
SF1-220ENST00000626028 C1QL4Q86Z23 238 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 TCTEX1D1Q8N7M0 179 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 ZNF383Q8NA42 475 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 OR8U1Q8NH10 309 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 GPR61Q9BZJ8 451 aa17.53■□□□□ 0.4
SF1-220ENST00000626028 M0R1X1 148 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 PPIFP30405 207 aaKnown RBP17.52■□□□□ 0.4
SF1-220ENST00000626028 MYCNOSP40205 109 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 CNIH2Q6PI25 160 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 DRAXINQ8NBI3 349 aaPredicted RBP17.52■□□□□ 0.4
SF1-220ENST00000626028 KLHL30-AS1Q8NEE0 82 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 ADTRPQ96IZ2 230 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 DIABLOQ9NR28 239 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 SDHAF2Q9NX18 166 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 TGP01266 2768 aa17.52■□□□□ 0.4
SF1-220ENST00000626028 TMEM235A6NFC5 223 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 NUDT19A8MXV4 375 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 ATP6V0E1O15342 81 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 SLC22A5O76082 557 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 RRASP10301 218 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 LGALS7P47929 136 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 OXLD1Q5BKU9 147 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 LINC00482Q8N8I6 264 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 MAFIPQ8WZ33 124 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 FLYWCH2Q96CP2 140 aaKnown RBP17.51■□□□□ 0.39
SF1-220ENST00000626028 SLC25A38Q96DW6 304 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 ST6GALNAC5Q9BVH7 336 aa17.51■□□□□ 0.39
SF1-220ENST00000626028 ELF5Q9UKW6 265 aaPredicted RBP17.51■□□□□ 0.39
SF1-220ENST00000626028 RBM7Q9Y580 266 aaKnown RBP17.51■□□□□ 0.39
SF1-220ENST00000626028 IGKV1-16P04430 117 aa17.5■□□□□ 0.39
SF1-220ENST00000626028 RPLP1P05386 114 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms