RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 CACNA1CQ13936 2221 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 IGKV3D-11A0A0A0MRZ8 115 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 UBE2CO00762 179 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CA1P00915 261 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 IGKV3-11P04433 115 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TDGF1P13385 188 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 HOXB3P14651 431 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 PIN1Q13526 163 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 RNASEKQ6P5S7 137 aaKnown RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 BPIFA4PQ86YQ2 179 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 PQLC3Q8N755 202 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 LY6G6CO95867 125 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 SLC25A4P12235 298 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 PRDX2P32119 198 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TIFABQ6ZNK6 161 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 C1QL2Q7Z5L3 287 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CACNG5Q9UF02 275 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 GPR132Q9UNW8 380 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 SDK2Q58EX2 2172 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 COL4A2P08572 1712 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TRBV5-4A0A0C4DH59 114 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A10PA6NDY2 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A18PA6NE21 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A16PA6NEW6 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A20PA6NIJ5 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A8PA6NJQ4 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A7PA6NKC0 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A22PA8MWA6 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A12PA8MX19 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A5PA8MXJ8 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A23PA8MXZ1 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 F5H5P2 479 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A15PP0C7V4 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A13PP0C7W8 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A14PP0C7W9 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FAM90A24PP0C7X0 464 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ZNF680Q8NEM1 530 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 GATA5Q9BWX5 397 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 PSENENQ9NZ42 101 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 A0A0U1RQV1 116 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CX3CL1P78423 397 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CBLL1Q75N03 491 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 OR5P3Q8WZ94 311 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ACTR3CQ9C0K3 210 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 FITM1A5D6W6 292 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TAPBPO15533 448 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CTAG1AP78358 180 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 LCN15Q6UWW0 184 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ZNF645Q8N7E2 425 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TREX1Q9NSU2 369 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 C7orf72A4D263 438 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 LINC01548A6NM66 108 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ZNF561-AS1K7EIQ3 104 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 XRCC3O43542 346 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CRLF1O75462 422 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 HIST1H1AQ02539 215 aaPredicted RBP2.85□□□□□ -1.95
LPP-220ENST00000617246 ZNF818PQ6ZRF7 136 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 BVESQ8NE79 360 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 ZNF721Q8TF20 911 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 TMEM140Q9NV12 185 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 CALYQ9NYX4 217 aa2.85□□□□□ -1.95
LPP-220ENST00000617246 FABP7O15540 132 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 MYCNOSP40205 109 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 C20orf196Q8IYI0 205 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 PARP16Q8N5Y8 322 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 IFT22Q9H7X7 185 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 TREM1Q9NP99 234 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 SDR39U1Q9NRG7 319 aaPredicted RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 LRP12Q9Y561 859 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 TRBV7-1A0A0A6YYK4 115 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 LOC105371267A0A1B0GV96 52 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 CALCBP10092 127 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 SLC25A6P12236 298 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 MGMTP16455 207 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 CACNG7P62955 275 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 GPR32P1Q8NGA4 272 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 INTS1Q8N201 2190 aaKnown RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 MAP1BP46821 2468 aaKnown RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 FCMRO60667 390 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 HLA-AP01891 365 aaKnown RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 DLX1P56177 255 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 SLC10A2Q12908 348 aaPredicted RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 SUN5Q8TC36 379 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 OR5AC2Q9NZP5 309 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 PUS1Q9Y606 427 aaKnown RBP eCLIP2.84□□□□□ -1.95
LPP-220ENST00000617246 TRAV26-2A0A0B4J265 109 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 J3KRW8 73 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 TBX19O60806 448 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 ZNF14P17017 642 aaPredicted RBP2.84□□□□□ -1.95
LPP-220ENST00000617246 MAGEB1P43366 347 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 C10orf113Q5VZT2 155 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 OR52N1Q8NH53 320 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 LINC00479Q96M42 142 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 DTX4Q9Y2E6 619 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 H3BUA1 57 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 CECR9P0C854 216 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 PGA4P0DJD7 388 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 PGA3P0DJD8 388 aa2.84□□□□□ -1.95
LPP-220ENST00000617246 CYS1Q717R9 158 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms