RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-233	ENST00000584186	KIR2DS1	Q14954	304 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	MOGAT2	Q3SYC2	334 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	RNF152	Q8N8N0	203 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	ABHD5	Q8WTS1	349 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	KLK15	Q9H2R5	256 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	GHITM	Q9H3K2	345 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	KCNK7	Q9Y2U2	307 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	WASHC3	Q9Y3C0	194 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186	A3GALT2	U3KPV4	340 aa		10.65	□□□□□ -0.7
CDK5RAP3-233	ENST00000584186		H0YJW9	148 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ITGB1BP1	O14713	200 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RRH	O14718	337 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	NDUFA3	O95167	84 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GADD45A	P24522	165 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	LINC00205	P59089	165 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	EGFEM1P	Q0D2K5	195 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ECSCR	Q19T08	205 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	CD200R1L	Q6Q8B3	271 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR10R2	Q8NGX6	335 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	C4orf3	Q8WVX3	66 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	MAFIP	Q8WZ33	124 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR5B12	Q96R08	314 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	CLCC1	Q96S66	551 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	CHCHD6	Q9BRQ6	235 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186		Q9H521	79 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RDH8	Q9NYR8	311 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ZNF580	Q9UK33	172 aa		10.64	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	FCN1	O00602	326 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	FABP7	O15540	132 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	PPIF	P30405	207 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	LUM	P51884	338 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	NDP	Q00604	133 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ARFRP1	Q13795	201 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	IGSF11	Q5DX21	431 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	UBE2U	Q5VVX9	321 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	SPART	Q8N0X7	666 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR11H1	Q8NG94	326 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR5AN1	Q8NGI8	311 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR4A4P	Q8NGN8	299 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR5M8	Q8NGP6	311 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR10J5	Q8NHC4	309 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	CASTOR1	Q8WTX7	329 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	PTX4	Q96A99	478 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ATG5	Q9H1Y0	275 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GNB4	Q9HAV0	340 aa		10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	METTL1	Q9UBP6	276 aa	Known RBP	10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ZNF230	Q9UIE0	474 aa	Predicted RBP	10.63	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186		A0A1W2PN81	502 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	METTL21EP	A6NDL7	271 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186		M0R1X1	148 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	MRPS14	O60783	128 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	PROP1	O75360	226 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RBBP9	O75884	186 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	TFAP2A	P05549	437 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	FCGR3A	P08637	254 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR8U9	P0C7N5	309 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GSTT2	P0CG29	244 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GSTT2B	P0CG30	244 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	HIST1H1D	P16402	221 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RAB6A	P20340	208 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	CHRNA7	P36544	502 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	TALDO1	P37837	337 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	SERPINB10	P48595	397 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RPS16	P62249	146 aa	Known RBP	10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	CX3CL1	P78423	397 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ZNF660	Q6AZW8	331 aa	Predicted RBP	10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	NR2C2AP	Q86WQ0	139 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ZNF383	Q8NA42	475 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	VSIG4	Q9Y279	399 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	FBXO7	Q9Y3I1	522 aa		10.62	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RAB27B	O00194	218 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	MFNG	O00587	321 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	IGLV1-40	P01703	118 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	APOA2	P02652	100 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	IGKV1-16	P04430	117 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	SNRPB	P14678	240 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GAL	P22466	123 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RAB9A	P51151	201 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	DGCR2	P98153	550 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	PSG5	Q15238	335 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	ZNF491	Q8N8L2	437 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	MINDY2	Q8NBR6	621 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR1N2	Q8NGR9	330 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	FCGR1B	Q92637	280 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	UBE2E2	Q96LR5	201 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GINS4	Q9BRT9	223 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	FAM103A1	Q9BTL3	118 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	OR2D2	Q9H210	308 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	TXNL4B	Q9NX01	149 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	STUB1	Q9UNE7	303 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GAB2	Q9UQC2	676 aa		10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	FOXA2	Q9Y261	457 aa	Predicted RBP	10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	RBM7	Q9Y580	266 aa	Known RBP	10.61	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	SEC14L6	B5MCN3	397 aa		10.6	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	CA2	P00918	260 aa		10.6	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	GNB1	P62873	340 aa		10.6	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	KIAA0141	Q14154	515 aa	Predicted RBP	10.6	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	PPP1R27	Q86WC6	154 aa		10.6	□□□□□ -0.71
CDK5RAP3-233	ENST00000584186	PDPN	Q86YL7	162 aa		10.6	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms