RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 NAA60Q9H7X0 242 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 GPN1Q9HCN4 374 aaPredicted RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 PLSCR3Q9NRY6 295 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 ZNF469Q96JG9 3925 aaPredicted RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 IGHV2-26A0A0B4J1V2 119 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 hCG_1809904A0A1W2PP81 198 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 A0A1W2PPE2 198 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 A0A1W2PR64 198 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 A0A1W2PRV1 198 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 SNRPGP15A8MWD9 76 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 J3QR06 171 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 ZNF16P17020 682 aaPredicted RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 RPL30P62888 115 aaKnown RBP8.33□□□□□ -1.08
SRP54-208ENST00000555557 KLRD1Q13241 179 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 FCN2Q15485 313 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 C2orf68Q2NKX9 166 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 ANKRD55Q3KP44 614 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 TMEM30BQ3MIR4 351 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 VMO1Q7Z5L0 202 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 PNKDQ8N490 385 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 CCDC71LQ8N9Z2 235 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 AKR1E2Q96JD6 320 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 PCGF1Q9BSM1 259 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 REG4Q9BYZ8 158 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 CCDC168Q8NDH2 2452 aa8.33□□□□□ -1.08
SRP54-208ENST00000555557 PDZD2O15018 2839 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 ABCA2Q9BZC7 2435 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 A0A087X0M5 115 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 SAA2-SAA4A0A096LPE2 208 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 C3orf85A0A1B0GTC6 90 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 A0A1B0GX30 115 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 A0A1W2PRD5 423 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 A0A1W2PRF3 423 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 A0A1W2PRM7 423 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 A8MV72 311 aaPredicted RBP8.32□□□□□ -1.08
SRP54-208ENST00000555557 M0R1W7 72 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 IFNA2P01563 188 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 RBP4P02753 201 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 SAA2P0DJI9 122 aaPredicted RBP8.32□□□□□ -1.08
SRP54-208ENST00000555557 RAB7AP51149 207 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 DVL1P1P54792 670 aaPredicted RBP8.32□□□□□ -1.08
SRP54-208ENST00000555557 RND3P61587 244 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 RRAS2P62070 204 aaPredicted RBP8.32□□□□□ -1.08
SRP54-208ENST00000555557 DIAPH2-AS1Q14236 149 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 PRSS57Q6UWY2 283 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 KCTD9Q7L273 389 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
SRP54-208ENST00000555557 MED28Q9H204 178 aa8.32□□□□□ -1.08
SRP54-208ENST00000555557 METTL8Q9H825 291 aaKnown RBP8.32□□□□□ -1.08
SRP54-208ENST00000555557 POLR3KQ9Y2Y1 108 aaPredicted RBP8.32□□□□□ -1.08
SRP54-208ENST00000555557 LINC00473A8K010 186 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 M0R1X1 148 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 TOR1AO14656 332 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 ITGB1BP1O14713 200 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 RAB29O14966 203 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 TOX4O94842 621 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 DUS4LO95620 317 aaKnown RBP8.31□□□□□ -1.08
SRP54-208ENST00000555557 CXCL3P19876 107 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 PRTN3P24158 256 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 F2RP25116 425 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 CD34P28906 385 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 EIF4EBP1Q13541 118 aaPredicted RBP8.31□□□□□ -1.08
SRP54-208ENST00000555557 OR2B11Q5JQS5 317 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 LY6G6FQ5SQ64 297 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 FAM122CQ6P4D5 195 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 TCTE3Q8IZS6 198 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 OR11H7Q8NGC8 314 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 OR10X1Q8NGY0 326 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 OR9G1Q8NH87 305 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 GLYATL2Q8WU03 294 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 MITD1Q8WV92 249 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 TNFRSF14Q92956 283 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 ZNF251Q9BRH9 671 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 SIRPDQ9H106 197 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 KCNIP3Q9Y2W7 256 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 INSIG2Q9Y5U4 225 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 KPTNQ9Y664 436 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 SIX6O95475 246 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 MSMBP08118 114 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 MMP9P14780 707 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 REG1BP48304 166 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 LOXL1Q08397 574 aaPredicted RBP8.31□□□□□ -1.08
SRP54-208ENST00000555557 TMEM187Q14656 261 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 Q5BKY6 102 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 HCP5Q6MZN7 132 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 ZBTB34Q8NCN2 500 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 GALNT14Q96FL9 552 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 TBX15Q96SF7 602 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 PHB2Q99623 299 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 CLEC7AQ9BXN2 247 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 PIPOXQ9P0Z9 390 aa8.31□□□□□ -1.08
SRP54-208ENST00000555557 CREBBPQ92793 2442 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 B4DSR2 109 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 RNASEK-C17orf49H0YIS7 233 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 CCSO14618 274 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 ADAP1O75689 374 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 SLC22A5O76082 557 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 IGLV1-47P01700 117 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 ANXA3P12429 323 aa8.3□□□□□ -1.08
SRP54-208ENST00000555557 S100GP29377 79 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms