RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 NDUFA3O95167 84 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 CTXN2P0C2S0 81 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 MC5RP33032 325 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 TGFBR1P36897 503 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 MMDQ15546 238 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 STPG2Q8N412 459 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 COMMD1Q8N668 190 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 NPBQ8NG41 125 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 OR4F17Q8NGA8 305 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 MAFIPQ8WZ33 124 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 OR4F4Q96R69 305 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 RNF5Q99942 180 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 RASL11BQ9BPW5 248 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 FUNDC2Q9BWH2 189 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 ZNF221Q9UK13 617 aa9.37□□□□□ -0.91
YBX3-217ENST00000546164 TSSC4Q9Y5U2 329 aaPredicted RBP9.37□□□□□ -0.91
YBX3-217ENST00000546164 NBR2O15453 112 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 SSX5O60225 188 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 HLA-DRB1P01911 266 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 IGF1P05019 195 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 SOX6P35712 828 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 GNG2P59768 71 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 LSM3P62310 102 aaKnown RBP9.36□□□□□ -0.91
YBX3-217ENST00000546164 C5orf64Q2M2E5 130 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 NSUN5P1Q3KNT7 163 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 C10orf99Q6UWK7 81 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 FAM131AQ6UXB0 335 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 H1FOOQ8IZA3 346 aaPredicted RBP9.36□□□□□ -0.91
YBX3-217ENST00000546164 FAM110DQ8TAY7 271 aaPredicted RBP9.36□□□□□ -0.91
YBX3-217ENST00000546164 NUDCD2Q8WVJ2 157 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 SLC25A46Q96AG3 418 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 RBMXL1Q96E39 390 aaKnown RBP9.36□□□□□ -0.91
YBX3-217ENST00000546164 RITA1Q96K30 269 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 NOL4LQ96MY1 436 aaPredicted RBP9.36□□□□□ -0.91
YBX3-217ENST00000546164 DIABLOQ9NR28 239 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 RNF150Q9ULK6 438 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 WASHC3Q9Y3C0 194 aa9.36□□□□□ -0.91
YBX3-217ENST00000546164 TRAV18A0A075B6X5 111 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 TCRBV4S1A1TA0A5B7 111 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 LINC01548A6NM66 108 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 TFAP2AP05549 437 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 OR8U9P0C7N5 309 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 NCS1P62166 190 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 SLC35B1P78383 322 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 CNIH2Q6PI25 160 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 GLDNQ6ZMI3 551 aaPredicted RBP9.35□□□□□ -0.91
YBX3-217ENST00000546164 ZNF329Q86UD4 541 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 OR8U1Q8NH10 309 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 HSPB9Q9BQS6 159 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 GINS4Q9BRT9 223 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 ST6GALNAC5Q9BVH7 336 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 GON7Q9BXV9 100 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 OR2D2Q9H210 308 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 AUNIPQ9H7T9 357 aa9.35□□□□□ -0.91
YBX3-217ENST00000546164 ZNF107Q9UII5 783 aaPredicted RBP9.35□□□□□ -0.91
YBX3-217ENST00000546164 DNAH3Q8TD57 4116 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 RRHO14718 337 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 XRCC3O43542 346 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 GABARAPO95166 117 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 CNTFRP26992 372 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 TAGLNQ01995 201 aaKnown RBP9.34□□□□□ -0.91
YBX3-217ENST00000546164 CFHR3Q02985 330 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 UBE2NLQ5JXB2 153 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 ANKRD13BQ86YJ7 626 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 PDPNQ86YL7 162 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 RNF152Q8N8N0 203 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 ZNF383Q8NA42 475 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 R3HDM4Q96D70 268 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 S100A16Q96FQ6 103 aaKnown RBP9.34□□□□□ -0.91
YBX3-217ENST00000546164 C5orf30Q96GV9 206 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 MRPS26Q9BYN8 205 aaKnown RBP9.34□□□□□ -0.91
YBX3-217ENST00000546164 ZFP57Q9NU63 452 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 SDHAF2Q9NX18 166 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 KIAA1456Q9P272 454 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 ANXA10Q9UJ72 324 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 LINC00527Q9UJ94 153 aa9.34□□□□□ -0.91
YBX3-217ENST00000546164 PRKDCP78527 4128 aaKnown RBP9.34□□□□□ -0.91
YBX3-217ENST00000546164 IGHV7-81A0A0B4J1V7 117 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 H7C2Y5 167 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 M0R1X1 148 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 SPDEFO95238 335 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 APOA2P02652 100 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 OR5H8P0DN80 308 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 SLC6A1P30531 599 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 ALDH3B2P48448 385 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 LINC00205P59089 165 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 VBP1P61758 197 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 CTF1Q16619 201 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 LIN54Q6MZP7 749 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 TEX38Q6PEX7 206 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 HOGA1Q86XE5 327 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 DRAXINQ8NBI3 349 aaPredicted RBP9.33□□□□□ -0.92
YBX3-217ENST00000546164 CMTM3Q96MX0 182 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 OR51J1Q9H342 316 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 OR2W1Q9Y3N9 320 aa9.33□□□□□ -0.92
YBX3-217ENST00000546164 TUSC2O75896 110 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 IGHG4P01861 327 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 HLA-DQB1P01920 261 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 IGKV1-16P04430 117 aa9.32□□□□□ -0.92
YBX3-217ENST00000546164 ELANEP08246 267 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms