RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 HNRNPA2B1P22626 353 aaKnown RBP11.49□□□□□ -0.57
PABPC1-208ENST00000519004 PPP1CAP62136 330 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 MUC21Q5SSG8 566 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 Q6ZSR3 168 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 ADIPOR1Q96A54 375 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 BORCS7Q96B45 105 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 KCNIP2Q9NS61 270 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
PABPC1-208ENST00000519004 IGKV1-12A0A0C4DH73 117 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 A0A0J9YY10 115 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 GJE1A6NN92 205 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 PGLYRP1O75594 196 aaPredicted RBP11.48□□□□□ -0.57
PABPC1-208ENST00000519004 ADH1BP00325 375 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 IGKV1D-12P01611 117 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 KIAA1644Q3SXP7 199 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 SPANXN5Q5MJ07 72 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 OR10P1Q8NGE3 313 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 OCC1Q8TAD7 63 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 ZNF816-ZNF321PA0A0X1KG74 233 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 PDCD6O75340 191 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 NUDT3O95989 172 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 CTSSP25774 331 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 CLRN1P58418 232 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 LILRA6Q6PI73 481 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 FAM58AQ8N1B3 248 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 OR1B1Q8NGR6 318 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 ST6GALNAC6Q969X2 333 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 QTRT1Q9BXR0 403 aaKnown RBP11.48□□□□□ -0.57
PABPC1-208ENST00000519004 RARRES3Q9UL19 164 aa11.48□□□□□ -0.57
PABPC1-208ENST00000519004 HIST3H3Q16695 136 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 SLC25A47Q6Q0C1 308 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 OSR2Q8N2R0 312 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 RDH5Q92781 318 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 ZC2HC1AQ96GY0 325 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 NAT8BQ9UHF3 227 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 ERRFI1Q9UJM3 462 aaPredicted RBP11.47□□□□□ -0.57
PABPC1-208ENST00000519004 TUSC2O75896 110 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 TNFP01375 233 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 COX5AP20674 150 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 NTF3P20783 257 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 DRD1P21728 446 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 F2RP25116 425 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 CD38P28907 300 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 MALLQ13021 153 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 OR1N2Q8NGR9 330 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 OR1E3Q8WZA6 343 aa11.47□□□□□ -0.57
PABPC1-208ENST00000519004 F5H5K5 113 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 K7EN84 100 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 M0R1X1 148 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 IGKV1-39P01597 117 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 IGKV1D-39P04432 117 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 PSG2P11465 335 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 GATA2P23769 480 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-208ENST00000519004 NTSR1P30989 418 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 DAZAP2Q15038 168 aaPredicted RBP11.46□□□□□ -0.57
PABPC1-208ENST00000519004 Q56UQ5 140 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 TRIM61Q5EBN2 209 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 TMEM136Q6ZRR5 245 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 SGCZQ96LD1 299 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 STRADBQ9C0K7 418 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 ZNF442Q9H7R0 627 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 HES4Q9HCC6 221 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 NOTCH4Q99466 2003 aa11.46□□□□□ -0.57
PABPC1-208ENST00000519004 A0A1W2PP55 124 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 BLACEA4D250 179 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 A6NJY4 79 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 GNG7O60262 68 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 SCTP09683 121 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 ATXN8OSP0DMR3 200 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 SRIP30626 198 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 MYBPHQ13203 477 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 TBR1Q16650 682 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 GAB4Q2WGN9 574 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 CARD17Q5XLA6 110 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 EBLN2Q6P2I7 272 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 CFAP161Q6P656 301 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 TMEM14EPQ6UXP3 125 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 MMD2Q8IY49 270 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 C10orf35Q96D05 121 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 PNO1Q9NRX1 252 aaKnown RBP11.46□□□□□ -0.58
PABPC1-208ENST00000519004 MMP17Q9ULZ9 603 aa11.46□□□□□ -0.58
PABPC1-208ENST00000519004 THADAQ6YHU6 1953 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 CD300LBA8K4G0 201 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 BMPR1BO00238 502 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 CD5LO43866 347 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 OTX1P32242 354 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-208ENST00000519004 TFF3Q07654 80 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 RPEL1Q2QD12 228 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 UFSP1Q6NVU6 142 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 RD3Q7Z3Z2 195 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 SPATA12Q7Z6I5 190 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 UBALD2Q8IYN6 164 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 C5orf17Q8NAS9 161 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 OR2Y1Q8NGV0 311 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 CPT1CQ8TCG5 803 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 OTOL1A6NHN0 477 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-208ENST00000519004 MT-ND6P03923 174 aa11.45□□□□□ -0.58
PABPC1-208ENST00000519004 GPR6P46095 362 aaPredicted RBP11.45□□□□□ -0.58
PABPC1-208ENST00000519004 Q6ZS49 121 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms