RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 HDHD3Q9BSH5 251 aaPredicted RBP6.55□□□□□ -1.36
NEDD4-210ENST00000513957 IFI27L2Q9H2X8 130 aa6.55□□□□□ -1.36
NEDD4-210ENST00000513957 ANK2Q01484 3957 aa6.55□□□□□ -1.36
NEDD4-210ENST00000513957 SAA2-SAA4A0A096LPE2 208 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 TRBV6-7A0A0A0MS04 114 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 A0A1W2PPE3 182 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 SLC31A2O15432 143 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 XRCC3O43542 346 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 TPPPO94811 219 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 MOSP00540 346 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 IGKV1D-33P01593 117 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 IGKV1-33P01594 117 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 IGHV3-7P01780 117 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 TFAP2AP05549 437 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 SNRNP70P08621 437 aaKnown RBP6.54□□□□□ -1.36
NEDD4-210ENST00000513957 SCTP09683 121 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 SAA2P0DJI9 122 aaPredicted RBP6.54□□□□□ -1.36
NEDD4-210ENST00000513957 TMEM11P17152 192 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 PAX6P26367 422 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 MC5RP33032 325 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 RPS19P39019 145 aaKnown RBP6.54□□□□□ -1.36
NEDD4-210ENST00000513957 RPL5P46777 297 aaKnown RBP6.54□□□□□ -1.36
NEDD4-210ENST00000513957 RAB13P51153 203 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 NCS1P62166 190 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 GNMTQ14749 295 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 CTF1Q16619 201 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 CDNFQ49AH0 187 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 UTF1Q5T230 341 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 GPR107Q5VW38 600 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 TMEM219Q86XT9 240 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 ODF3L1Q8IXM7 274 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 DRAM1Q8N682 238 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 UBALD1Q8TB05 177 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 AGMATQ9BSE5 352 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 ZNF702PQ9H963 129 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 GAB2Q9UQC2 676 aa6.54□□□□□ -1.36
NEDD4-210ENST00000513957 A0A075B6Q4 140 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 TMEM235A6NFC5 223 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 NOL3O60936 208 aaKnown RBP6.53□□□□□ -1.36
NEDD4-210ENST00000513957 RBBP9O75884 186 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 SLC22A5O76082 557 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 APOA1P02647 267 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 SOX6P35712 828 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 CEACAM6P40199 344 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 TMBIM6P55061 237 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 VBP1P61758 197 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 LSM3P62310 102 aaKnown RBP6.53□□□□□ -1.36
NEDD4-210ENST00000513957 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 HES1Q14469 280 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 HERPUD1Q15011 391 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 BAK1Q16611 211 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 CNIH2Q6PI25 160 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 MOB3BQ86TA1 216 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 Q8N6K4 173 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 C5orf56Q8N8D9 126 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 OR5H6Q8NGV6 325 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 C15orf40Q8WUR7 153 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 RNF5Q99942 180 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 GINS4Q9BRT9 223 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 LIN7CQ9NUP9 197 aaKnown RBP6.53□□□□□ -1.36
NEDD4-210ENST00000513957 RDH8Q9NYR8 311 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 ZNF221Q9UK13 617 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 ZNF580Q9UK33 172 aa6.53□□□□□ -1.36
NEDD4-210ENST00000513957 IGKV1-6A0A0C4DH72 117 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 SMIM31A0A1B0GVY4 71 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 M0QZ24 198 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 ST8SIA5O15466 376 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 KCNAB3O43448 404 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF182P17025 639 aaPredicted RBP6.52□□□□□ -1.37
NEDD4-210ENST00000513957 ARL3P36405 182 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 TGFBR1P36897 503 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 VDAC2P45880 294 aaPredicted RBP6.52□□□□□ -1.37
NEDD4-210ENST00000513957 GPR12P47775 334 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 REG1BP48304 166 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 MSMO1Q15800 293 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 PRR31Q5SQ13 230 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 TMEM69Q5SWH9 247 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 Q6ZS46 218 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 H1FOOQ8IZA3 346 aaPredicted RBP6.52□□□□□ -1.37
NEDD4-210ENST00000513957 SAMD12Q8N8I0 201 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 OR5AN1Q8NGI8 311 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 ADTRPQ96IZ2 230 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 NABP2Q9BQ15 211 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 ZNF251Q9BRH9 671 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 GON7Q9BXV9 100 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 C11orf54Q9H0W9 315 aaPredicted RBP6.52□□□□□ -1.37
NEDD4-210ENST00000513957 AUNIPQ9H7T9 357 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 HEYLQ9NQ87 328 aaPredicted RBP6.52□□□□□ -1.37
NEDD4-210ENST00000513957 SERTAD4Q9NUC0 356 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 OR1A1Q9P1Q5 309 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 ANXA10Q9UJ72 324 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
NEDD4-210ENST00000513957 TRAV18A0A075B6X5 111 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 SULT1C2O00338 296 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 BET1O15155 118 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 SPDEFO95238 335 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 IGHG2P01859 326 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 APOA2P02652 100 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 AMY1AP04745 511 aa6.51□□□□□ -1.37
NEDD4-210ENST00000513957 CSF1P09603 554 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms