RNA–Protein interactions for RNA: ENST00000405925.2

LIG4-202, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-202ENST00000405925 ZNF645Q8N7E2 425 aa7.67□□□□□ -1.18
LIG4-202ENST00000405925 OR9G1Q8NH87 305 aa7.67□□□□□ -1.18
LIG4-202ENST00000405925 NEUROG1Q92886 237 aa7.67□□□□□ -1.18
LIG4-202ENST00000405925 UHRF2Q96PU4 802 aa7.67□□□□□ -1.18
LIG4-202ENST00000405925 MS4A7Q9GZW8 240 aaPredicted RBP7.67□□□□□ -1.18
LIG4-202ENST00000405925 SERTAD4Q9NUC0 356 aa7.67□□□□□ -1.18
LIG4-202ENST00000405925 PPP1R14DQ9NXH3 145 aa7.67□□□□□ -1.18
LIG4-202ENST00000405925 ZFYVE26Q68DK2 2539 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 RPS10-NUDT3A0A1W2PQS6 291 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ZNF503-AS2A6NEH8 195 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 H0Y980 276 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 SLC25A6P12236 298 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 CCL3L1P16619 93 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ZP1P60852 638 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ACOT6Q3I5F7 207 aaPredicted RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 MBNL2Q5VZF2 373 aaKnown RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 ZNF529Q6P280 563 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ACSM6Q6P461 480 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ZNF66Q6ZN08 573 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ZNF818PQ6ZRF7 136 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 PNKDQ8N490 385 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 DRAM1Q8N682 238 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 NTNG2Q96CW9 530 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 RASL11BQ9BPW5 248 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 NMES1Q9C002 83 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 TMEM222Q9H0R3 208 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 SEBOXQ9HB31 216 aaPredicted RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 RPS10P5Q9NQ39 176 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 GNG13Q9P2W3 67 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 HPRT1P00492 218 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 RBP4P02753 201 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 S100A9P06702 114 aaKnown RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 LCN2P80188 198 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 C1QTNF12Q5T7M4 302 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 FAM168AQ92567 244 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 MARC2Q969Z3 335 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 SLX1AQ9BQ83 275 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 PRNDQ9UKY0 176 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 IGHV3OR16-10A0A075B7F0 116 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 A0A0A6YYD4 124 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 TRAV24A0A0B4J272 114 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 A0A1B0GU03 582 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 E9PQ18 207 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 NUPL2O15504 423 aaKnown RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 FOXH1O75593 365 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 SCAF4O95104 1147 aaKnown RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 SNRNP70P08621 437 aaKnown RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 OR13C7P0DN81 318 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 RRASP10301 218 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 PSMB3P49720 205 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 HAGHQ16775 308 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 IZUMO4Q1ZYL8 232 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ANKRD55Q3KP44 614 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 RPL7L1Q6DKI1 246 aaKnown RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 FAM89BQ8N5H3 189 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 CMTM2Q8TAZ6 248 aa7.66□□□□□ -1.18
LIG4-202ENST00000405925 ACTR3CQ9C0K3 210 aaPredicted RBP7.66□□□□□ -1.18
LIG4-202ENST00000405925 CRYM-AS1A6NIL9 109 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 SRRM5B3KS81 715 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 J3QR06 171 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 LY86O95711 162 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 HOXD11P31277 338 aaPredicted RBP7.65□□□□□ -1.18
LIG4-202ENST00000405925 Q56UQ5 140 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 TMEM42Q69YG0 159 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 MRPL30Q8TCC3 161 aaKnown RBP7.65□□□□□ -1.18
LIG4-202ENST00000405925 CLEC7AQ9BXN2 247 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 SLC2A8Q9NY64 477 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 TXNL1O43396 289 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 SRSF10O75494 262 aaKnown RBP7.65□□□□□ -1.18
LIG4-202ENST00000405925 WISP2O76076 250 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 PRB3Q04118 309 aaPredicted RBP7.65□□□□□ -1.18
LIG4-202ENST00000405925 ADIPOQQ15848 244 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 ZNF672Q499Z4 452 aaPredicted RBP7.65□□□□□ -1.18
LIG4-202ENST00000405925 OR1L8Q8NGR8 309 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 LURAP1Q96LR2 239 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 THYN1Q9P016 225 aa7.65□□□□□ -1.18
LIG4-202ENST00000405925 RCC2Q9P258 522 aaKnown RBP7.65□□□□□ -1.18
LIG4-202ENST00000405925 HMSDA8MTL9 139 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 COX7A2P2O60397 106 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 CD37P11049 281 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 MC5RP33032 325 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 FAM90A1Q86YD7 464 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 FGFRL1Q8N441 504 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 LFNGQ8NES3 379 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 OR10A7Q8NGE5 316 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 LILRB1Q8NHL6 650 aaPredicted RBP7.65□□□□□ -1.19
LIG4-202ENST00000405925 CRIM1Q9NZV1 1036 aa7.65□□□□□ -1.19
LIG4-202ENST00000405925 MLNRO43193 412 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 SLC25A17O43808 307 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 LY6HO94772 140 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 MBP02144 154 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 M6PRP20645 277 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 TAS2R45P59539 299 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 BPIFB3P59826 476 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 RAB4BP61018 213 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 ZNF787Q6DD87 383 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 COLCA1Q6ZS62 124 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 SSBP3Q9BWW4 388 aaPredicted RBP7.64□□□□□ -1.19
LIG4-202ENST00000405925 TMEM231Q9H6L2 316 aa7.64□□□□□ -1.19
LIG4-202ENST00000405925 A0A0C4DFX4 3053 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms