RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 IL1F10Q8WWZ1 152 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 GALNT14Q96FL9 552 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 AQP10Q96PS8 301 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 CABLES2Q9BTV7 478 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 SUCNR1Q9BXA5 334 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 DNTTIP1Q9H147 329 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 ZC4H2Q9NQZ6 224 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 CYTL1Q9NRR1 136 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 NBPF19A0A087WUL8 3843 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 ODAMA1E959 279 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 C12orf77C9JDV5 145 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 DIRAS3O95661 229 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 FGF2P09038 288 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 CTXN2P0C2S0 81 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 PLA2G2AP14555 144 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 TLE4Q04727 773 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 LIAT1Q6ZQX7 453 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 LYZL2Q7Z4W2 148 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 FGFRL1Q8N441 504 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 BVESQ8NE79 360 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 SECTM1Q8WVN6 248 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 DCTN5Q9BTE1 182 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 FAM234AQ9H0X4 552 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 PLEKHF2Q9H8W4 249 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 PCDHB10Q9UN67 800 aa10.97□□□□□ -0.65
VRK3-205ENST00000593919 MALRD1Q5VYJ5 2156 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 CLEC18AA5D8T8 446 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 A8MXK9 166 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 TNFRSF13BO14836 293 aaPredicted RBP10.96□□□□□ -0.65
VRK3-205ENST00000593919 DAOP14920 347 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 HSD17B13Q7Z5P4 300 aaPredicted RBP10.96□□□□□ -0.65
VRK3-205ENST00000593919 CLEC18CQ8NCF0 446 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 TP53RKQ96S44 253 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 SLC5A7Q9GZV3 580 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 OR2S2Q9NQN1 319 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 KCNIP1Q9NZI2 227 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 FBN2P35556 2912 aa10.96□□□□□ -0.65
VRK3-205ENST00000593919 ADAM20O43506 726 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 DEDDO75618 318 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 FCN3O75636 299 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 HKR1P10072 659 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 SSTR5P35346 364 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 MRPS11P82912 194 aaKnown RBP10.96□□□□□ -0.66
VRK3-205ENST00000593919 LYPD2Q6UXB3 125 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 BAP18Q8IXM2 172 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 LGI3Q8N145 548 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 ZNF565Q8N9K5 539 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 OR10J5Q8NHC4 309 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 GLYATL2Q8WU03 294 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 C18orf12Q96KH6 178 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 BARX1Q9HBU1 254 aaPredicted RBP10.96□□□□□ -0.66
VRK3-205ENST00000593919 OR1A1Q9P1Q5 309 aa10.96□□□□□ -0.66
VRK3-205ENST00000593919 CSMD2Q7Z408 3487 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 PTPN13Q12923 2485 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 NDUFS7O75251 213 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 IGHV2-70P01814 119 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 HBZP02008 142 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 GNRHRP30968 328 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 OR1L1Q8NH94 360 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 LHFPL5Q8TAF8 219 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 TMED6Q8WW62 240 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 MSI2Q96DH6 328 aaKnown RBP10.95□□□□□ -0.66
VRK3-205ENST00000593919 LURAP1Q96LR2 239 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 TAS2R3Q9NYW6 316 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 CTSZQ9UBR2 303 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 SLC25A10Q9UBX3 287 aaPredicted RBP10.95□□□□□ -0.66
VRK3-205ENST00000593919 NUP50Q9UKX7 468 aa10.95□□□□□ -0.66
VRK3-205ENST00000593919 MAP1AP78559 2803 aaPredicted RBP10.95□□□□□ -0.66
VRK3-205ENST00000593919 IGKV1D-13A0A0B4J2D9 117 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 C3orf85A0A1B0GTC6 90 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 NPIPB11E5RHQ5 1161 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 J3QKU1 62 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 K7EPK0 472 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 HSD17B6O14756 317 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 MPPED1O15442 326 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 TUSC2O75896 110 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 FSTL3O95633 263 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 MBPP02686 304 aaPredicted RBP10.94□□□□□ -0.66
VRK3-205ENST00000593919 IGKV1-13P0DP09 117 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 COX6B1P14854 86 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 NDUFB7P17568 137 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 RPL12P30050 165 aaKnown RBP10.94□□□□□ -0.66
VRK3-205ENST00000593919 SP5Q6BEB4 398 aaPredicted RBP10.94□□□□□ -0.66
VRK3-205ENST00000593919 TBC1D26Q86UD7 250 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 H1FOOQ8IZA3 346 aaPredicted RBP10.94□□□□□ -0.66
VRK3-205ENST00000593919 FAM71E2Q8N5Q1 922 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 LRTM2Q8N967 370 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 ARL11Q969Q4 196 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 GALMQ96C23 342 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 C14orf79Q96F83 325 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 GPHA2Q96T91 129 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 KAAG1Q9UBP8 84 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 KRBOX1C9JBD0 128 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 C15orf65H3BRN8 121 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 OVOL3O00110 214 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 HSPA12AO43301 675 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 NDUFA2O43678 99 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 IL2RGP31785 369 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 CR1LQ2VPA4 569 aa10.94□□□□□ -0.66
VRK3-205ENST00000593919 AVPI1Q5T686 147 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms