RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 RFESDQ8TAC1 157 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 TSNAXQ99598 290 aaKnown RBP8.18□□□□□ -1.1
SMG1-205ENST00000561947 WSB1Q9Y6I7 421 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 APC2O95996 2303 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 AGPAT2O15120 278 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 SYNGR2O43760 224 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 IGHV1-46P01743 117 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 ATP6V0CP27449 155 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 TMEM108Q6UXF1 575 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 TMEM182Q6ZP80 229 aaPredicted RBP8.18□□□□□ -1.1
SMG1-205ENST00000561947 STX12Q86Y82 276 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 SVBPQ8N300 66 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 FGFRL1Q8N441 504 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 TMEM217Q8N7C4 229 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 NKX6-2Q9C056 277 aaPredicted RBP8.18□□□□□ -1.1
SMG1-205ENST00000561947 C19orf12Q9NSK7 152 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 JKAMPQ9P055 326 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 IL19Q9UHD0 177 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 MMP24Q9Y5R2 645 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 CACNA1DQ01668 2161 aa8.18□□□□□ -1.1
SMG1-205ENST00000561947 PTPRZ1P23471 2315 aaPredicted RBP8.18□□□□□ -1.1
SMG1-205ENST00000561947 MEX3AA1L020 520 aaKnown RBP8.17□□□□□ -1.1
SMG1-205ENST00000561947 RNASEK-C17orf49H0YIS7 233 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 TRIM77I1YAP6 450 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 K7N7A8 449 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 RAMP3O60896 148 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 C1QL1O75973 258 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 TSPAN15O95858 294 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 PRH1P02810 166 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 CD5P06127 495 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 GZMHP20718 246 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 CD80P33681 288 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 SULT1A1P50225 295 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 TNFAIP6P98066 277 aaPredicted RBP8.17□□□□□ -1.1
SMG1-205ENST00000561947 ZNF616Q08AN1 781 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 ZNF273Q14593 569 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 CR1LQ2VPA4 569 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 MIDNQ504T8 468 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 COMMD1Q8N668 190 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 TCTEX1D1Q8N7M0 179 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 FAM222BQ8WU58 562 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 C17orf50Q8WW18 174 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 TCTEX1D2Q8WW35 142 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 SNRNP40Q96DI7 357 aaKnown RBP8.17□□□□□ -1.1
SMG1-205ENST00000561947 ATP5SQ99766 215 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 SEC11CQ9BY50 192 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 COA4Q9NYJ1 87 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 RNF7Q9UBF6 113 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 SH3BGRL2Q9UJC5 107 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 ACACAQ13085 2346 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 DEFB108AA8MXU0 73 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 FAM90A26D6RGX4 464 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 H3BP45 60 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 TOR1AO14656 332 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 TNFSF4P23510 183 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 PTAFRP25105 342 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 FHITP49789 147 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 GUCA2BQ16661 112 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 PRR30Q53SZ7 412 aaPredicted RBP8.17□□□□□ -1.1
SMG1-205ENST00000561947 OR2B11Q5JQS5 317 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 BTNL3Q6UXE8 466 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 ZNF66Q6ZN08 573 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 WFDC8Q8IUA0 241 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 ZNRF1Q8ND25 227 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 OR2G3Q8NGZ4 309 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 EDARADDQ8WWZ3 215 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 GCM1Q9NP62 436 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 JPT1Q9UK76 154 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 PSG11Q9UQ72 335 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 RAI1Q7Z5J4 1906 aaPredicted RBP8.17□□□□□ -1.1
SMG1-205ENST00000561947 DSCAMO60469 2012 aa8.17□□□□□ -1.1
SMG1-205ENST00000561947 ANKRD11Q6UB99 2663 aaPredicted RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 C17orf98A8MV24 154 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 DNASE2O00115 360 aaPredicted RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 DFFBO76075 338 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 CLDN1O95832 211 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 P0C879 139 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 IAPPP10997 89 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 SNCAP37840 140 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 DVL1P1P54792 670 aaPredicted RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 TAS2R30P59541 319 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 TMEM267Q0VDI3 215 aaPredicted RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 ZNF816Q0VGE8 651 aaPredicted RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 LTC4SQ16873 150 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 PUSL1Q8N0Z8 303 aaKnown RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 FAM216AQ8WUB2 273 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 GNPNAT1Q96EK6 184 aaPredicted RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 HSD17B10Q99714 261 aaKnown RBP8.16□□□□□ -1.1
SMG1-205ENST00000561947 AGMATQ9BSE5 352 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 PSENENQ9NZ42 101 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 MSRB2Q9Y3D2 182 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 UMAD1C9J7I0 102 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 S1PR2O95136 353 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 BRWD1-AS2P59051 145 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 Q3ZCU0 254 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 FAM201AQ5SY85 155 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 ZNF561Q8N587 486 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 FAM213BQ8TBF2 198 aa8.16□□□□□ -1.1
SMG1-205ENST00000561947 Q8TCH9 128 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms