RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 UNQ6494/PRO21346Q6UXR6 183 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 OR5AU1Q8NGC0 362 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 CLEC7AQ9BXN2 247 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 MAP1LC3CQ9BXW4 147 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 MAP1LC3BQ9GZQ8 125 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 LPAR5Q9H1C0 372 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 SBF2Q86WG5 1849 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 HLA-GP17693 338 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 REG1BP48304 166 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 REC114Q7Z4M0 266 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 SAXO1Q8IYX7 474 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 FABP2P12104 132 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 P2RY1P47900 373 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 HSD17B13Q7Z5P4 300 aaPredicted RBP9.27□□□□□ -0.93
COLCA1-203ENST00000532918 OR4A5Q8NH83 315 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 PGLYRP3Q96LB9 341 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 NEURL2Q9BR09 285 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF426Q9BUY5 554 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF729A6NN14 1252 aaPredicted RBP9.27□□□□□ -0.93
COLCA1-203ENST00000532918 INHBBP09529 407 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
COLCA1-203ENST00000532918 GAMTQ14353 236 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF343Q6P1L6 599 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 FADS6Q8N9I5 356 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 TMEM116Q8NCL8 245 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 OR4X1Q8NH49 305 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 SRXN1Q9BYN0 137 aa9.27□□□□□ -0.93
COLCA1-203ENST00000532918 IGKV3-7A0A075B6H7 116 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 ANKRD20A5PA0PJZ0 165 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 SS18L1O75177 396 aaPredicted RBP9.26□□□□□ -0.93
COLCA1-203ENST00000532918 MUC1P15941 1255 aaPredicted RBP9.26□□□□□ -0.93
COLCA1-203ENST00000532918 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
COLCA1-203ENST00000532918 RPEL1Q2QD12 228 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 LHFPL5Q8TAF8 219 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 MS4A3Q96HJ5 214 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 HIGD1AQ9Y241 93 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 ZNF253O75346 499 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 CD59P13987 128 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 SLC6A1P30531 599 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 CFHR1Q03591 330 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 TMEM186Q96B77 213 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 SIGLEC12Q96PQ1 595 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 DMRTA2Q96SC8 542 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 GPR61Q9BZJ8 451 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 ATG2BQ96BY7 2078 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 IFITM10A6NMD0 228 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 E9PLN8 166 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 CYB5R3P00387 301 aaPredicted RBP9.26□□□□□ -0.93
COLCA1-203ENST00000532918 HBZP02008 142 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 IGKV3-11P04433 115 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 IL11P20809 199 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 CD40P25942 277 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 DSCR9P59020 149 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 ARF6P62330 175 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 PRSS54Q6PEW0 395 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 SEZ6L2Q6UXD5 910 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 C16orf82Q7Z2V1 217 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 CTHRC1Q96CG8 243 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 RAX2Q96IS3 184 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 VKORC1Q9BQB6 163 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 TRAV30A0A087WSZ9 112 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 OR2H2O95918 312 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 HLA-DRB5Q30154 266 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 KHDC3LQ587J8 217 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 DNM1P46Q6ZS02 220 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 BVESQ8NE79 360 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 VWCEQ96DN2 955 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 AKIP1Q9NQ31 210 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 PAM16Q9Y3D7 125 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 PARP14Q460N5 1801 aa9.26□□□□□ -0.93
COLCA1-203ENST00000532918 NPIPB13A6NJU9 1138 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 NPIPB4C9JG80 1138 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 HTN1P15515 57 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 ATP5G2Q06055 141 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 PNRC1Q12796 327 aaPredicted RBP9.25□□□□□ -0.93
COLCA1-203ENST00000532918 FAM219BQ5XKK7 198 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 NSUN5P2Q63ZY6 315 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 OR52M1Q8NGK5 317 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 OR2T10Q8NGZ9 312 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 MANBALQ9NQG1 85 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 RBBP6Q7Z6E9 1792 aaKnown RBP9.25□□□□□ -0.93
COLCA1-203ENST00000532918 SPINK4O60575 86 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 RECKO95980 971 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 ADAT3Q96EY9 351 aaPredicted RBP9.25□□□□□ -0.93
COLCA1-203ENST00000532918 COL11A1P12107 1806 aaPredicted RBP9.25□□□□□ -0.93
COLCA1-203ENST00000532918 CDRT15L2A8MXV6 281 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 CDS2O95674 445 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 VSIG8P0DPA2 414 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 KIR2DL2P43627 348 aaPredicted RBP9.25□□□□□ -0.93
COLCA1-203ENST00000532918 DLX1P56177 255 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 FAM78BQ5VT40 261 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 ABHD12Q8N2K0 398 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 TMEM54Q969K7 222 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 CALYQ9NYX4 217 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 ODAMA1E959 279 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 PRSS23O95084 383 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 PTHLHP12272 177 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 FSTP19883 344 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 ROM1Q03395 351 aa9.25□□□□□ -0.93
COLCA1-203ENST00000532918 ACSF3Q4G176 576 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms