RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 PTBP1P26599 531 aaKnown RBP eCLIP16.1■□□□□ 0.17
SF1-213ENST00000472725 ACTBP60709 375 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 ACTG1P63261 375 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 HABP2Q14520 560 aaPredicted RBP16.1■□□□□ 0.17
SF1-213ENST00000472725 C16orf87Q6PH81 154 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 TGIF2LXQ8IUE1 241 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 ODF3L1Q8IXM7 274 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.1■□□□□ 0.17
SF1-213ENST00000472725 PIFOQ8TCI5 191 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 RTN4IP1Q8WWV3 396 aaPredicted RBP16.1■□□□□ 0.17
SF1-213ENST00000472725 FCAMRQ8WWV6 532 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 SNAPC3Q92966 411 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 S1PR3Q99500 378 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 SOSTQ9BQB4 213 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 RAB18Q9NP72 206 aa16.1■□□□□ 0.17
SF1-213ENST00000472725 ZNF107Q9UII5 783 aaPredicted RBP16.1■□□□□ 0.17
SF1-213ENST00000472725 ZFHX3Q15911 3703 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 A0A1W2PPI3 338 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 FABP12A6NFH5 140 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 RBBP9O75884 186 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 IL18Q14116 193 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 CDK10Q15131 360 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 ZNF833PQ6ZTB9 187 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 MTFP1Q9UDX5 166 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 ZNF221Q9UK13 617 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 TCF19Q9Y242 345 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 OR2W1Q9Y3N9 320 aa16.09■□□□□ 0.17
SF1-213ENST00000472725 IGHV1-3A0A0C4DH29 117 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 MEIS3P1A6NDR6 274 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 FAM90A9PA6NNJ1 464 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 ST8SIA5O15466 376 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 SLC22A5O76082 557 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 ACTBL2Q562R1 376 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 C16orf82Q7Z2V1 217 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 GCDHQ92947 438 aaPredicted RBP16.08■□□□□ 0.16
SF1-213ENST00000472725 CHIAQ9BZP6 476 aa16.08■□□□□ 0.16
SF1-213ENST00000472725 SAA2-SAA4A0A096LPE2 208 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 TUSC2O75896 110 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 FAM106CPP0CH98 169 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 SAA2P0DJI9 122 aaPredicted RBP16.07■□□□□ 0.16
SF1-213ENST00000472725 OR5H8P0DN80 308 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 TBPP20226 339 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 CD1BP29016 333 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 ETV6P41212 452 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 OR3A3P47888 321 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 LINC00299Q6ZSB3 139 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 OVCH2Q7RTZ1 564 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 SMIM4Q8WVI0 70 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 GIMAP1Q8WWP7 306 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 TMEM158Q8WZ71 300 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 CFHR4Q92496 578 aa16.07■□□□□ 0.16
SF1-213ENST00000472725 PARP12Q9H0J9 701 aaKnown RBP16.07■□□□□ 0.16
SF1-213ENST00000472725 TIMM23O14925 209 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 GSTZ1O43708 216 aaPredicted RBP16.06■□□□□ 0.16
SF1-213ENST00000472725 PAX6P26367 422 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 GPR12P47775 334 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 DYRK1AQ13627 763 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 DIAPH2-AS1Q14236 149 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 PLA1AQ53H76 456 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 CCDC190Q86UF4 302 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 LYSMD2Q8IV50 215 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 OR6Q1Q8NGQ2 317 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 OR5H2Q8NGV7 314 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 OR52I2Q8NH67 350 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 DUX5Q96PT3 197 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 ZNF251Q9BRH9 671 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 TAS2R8Q9NYW2 309 aa16.06■□□□□ 0.16
SF1-213ENST00000472725 RBM7Q9Y580 266 aaKnown RBP16.06■□□□□ 0.16
SF1-213ENST00000472725 A6NDX4 124 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 GPR137BO60478 399 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 CRYBA1P05813 215 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 OR8U9P0C7N5 309 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 LUMP51884 338 aaPredicted RBP16.05■□□□□ 0.16
SF1-213ENST00000472725 EBI3Q14213 229 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 MSMO1Q15800 293 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 SPANXN2Q5MJ10 180 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 DHRS11Q6UWP2 260 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 FAM131AQ6UXB0 335 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 MOB3BQ86TA1 216 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 DRAM1Q8N682 238 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 OR8U1Q8NH10 309 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 ABHD14BQ96IU4 210 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 AKR1E2Q96JD6 320 aa16.05■□□□□ 0.16
SF1-213ENST00000472725 NFYAP23511 347 aaPredicted RBP16.04■□□□□ 0.16
SF1-213ENST00000472725 FCGR2CP31995 323 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 REG1BP48304 166 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 RAB13P51153 203 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 TMEM229BQ8NBD8 167 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 OR56B4Q8NH76 319 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 OR2D2Q9H210 308 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 EHFQ9NZC4 300 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 KLK11Q9UBX7 282 aa16.04■□□□□ 0.16
SF1-213ENST00000472725 RBMX2Q9Y388 322 aaKnown RBP16.04■□□□□ 0.16
SF1-213ENST00000472725 FAM181BA6NEQ2 426 aa16.03■□□□□ 0.16
SF1-213ENST00000472725 ZNF736B4DX44 427 aaPredicted RBP16.03■□□□□ 0.16
SF1-213ENST00000472725 MC5RP33032 325 aa16.03■□□□□ 0.16
SF1-213ENST00000472725 DGCR2P98153 550 aa16.03■□□□□ 0.16
SF1-213ENST00000472725 TAGLNQ01995 201 aaKnown RBP16.03■□□□□ 0.16
SF1-213ENST00000472725 LSAMPQ13449 338 aa16.03■□□□□ 0.16
SF1-213ENST00000472725 VAX1Q5SQQ9 334 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms