RNA–Protein interactions for RNA: ENST00000444457.5

PMPCB-204, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 2,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-204ENST00000444457 CPEB3Q8NE35 698 aaKnown RBP16.08■□□□□ 0.17
PMPCB-204ENST00000444457 ZCCHC14Q8WYQ9 949 aaKnown RBP16.08■□□□□ 0.17
PMPCB-204ENST00000444457 SPSB4Q96A44 273 aa16.08■□□□□ 0.17
PMPCB-204ENST00000444457 C1QTNF5Q9BXJ0 243 aa16.08■□□□□ 0.17
PMPCB-204ENST00000444457 TMEM250H0YL14 139 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 TMEM267Q0VDI3 215 aaPredicted RBP16.08■□□□□ 0.16
PMPCB-204ENST00000444457 TMEM41BQ5BJD5 291 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 SPIN3Q5JUX0 258 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF818PQ6ZRF7 136 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 MS4A10Q96PG2 267 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 TECTBQ96PL2 329 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 STRADBQ9C0K7 418 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 PRDM14Q9GZV8 571 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 ASCL3Q9NQ33 180 aa16.08■□□□□ 0.16
PMPCB-204ENST00000444457 YLPM1P49750 1951 aaKnown RBP16.08■□□□□ 0.16
PMPCB-204ENST00000444457 H3BP45 60 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 PDCD6O75340 191 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 MRPL33O75394 65 aaKnown RBP16.07■□□□□ 0.16
PMPCB-204ENST00000444457 WNT5AP41221 380 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 NRN1LQ496H8 165 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 RPUSD4Q96CM3 377 aaKnown RBP16.07■□□□□ 0.16
PMPCB-204ENST00000444457 IGKV3D-15A0A087WSY6 115 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 RBM11P57052 281 aaKnown RBP16.07■□□□□ 0.16
PMPCB-204ENST00000444457 LCN2P80188 198 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 CALHM1Q8IU99 346 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 IL22RA2Q969J5 263 aa16.07■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF703Q9H7S9 590 aaPredicted RBP16.07■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF705FA8MVS1 300 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-204ENST00000444457 YPEL1O60688 119 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 TNFSF13O75888 250 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 NEURL1O76050 574 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF705DP0CH99 300 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF705BP0CI00 300 aaPredicted RBP16.06■□□□□ 0.16
PMPCB-204ENST00000444457 RPL15P61313 204 aaKnown RBP16.06■□□□□ 0.16
PMPCB-204ENST00000444457 PDCD1Q15116 288 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 GAPTQ8N292 157 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 OR2M7Q8NG81 312 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 OR5D13Q8NGL4 314 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 YPEL2Q96QA6 119 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 RAB40CQ96S21 281 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 FAM173AQ9BQD7 235 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 SPRY4Q9C004 299 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 PARLQ9H300 379 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 SELEP16581 610 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 LHX2P50458 406 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 SRYQ05066 204 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 MALLQ13021 153 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 TEX43Q6ZNM6 134 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 COLCA1Q6ZS62 124 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF525Q8N782 197 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF611Q8N823 705 aa16.06■□□□□ 0.16
PMPCB-204ENST00000444457 PINX1Q96BK5 328 aaKnown RBP16.06■□□□□ 0.16
PMPCB-204ENST00000444457 KIAA1324LA8MWY0 1029 aaPredicted RBP16.05■□□□□ 0.16
PMPCB-204ENST00000444457 C9orf172C9J069 976 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 TNFSF12O43508 249 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 LRRC75BQ2VPJ9 315 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 TMEM256Q8N2U0 113 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 SDSLQ96GA7 329 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 GPHA2Q96T91 129 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 LINC00470Q9BZP3 86 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 KMT2EQ8IZD2 1858 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 LNP1A1A4G5 178 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 LILRA1O75019 489 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 CELA3AP09093 270 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF883P0CG24 379 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 GNG10P50151 68 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 TNFSF10P50591 281 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 UBE2NP61088 152 aaKnown RBP16.05■□□□□ 0.16
PMPCB-204ENST00000444457 ARF1P84077 181 aaKnown RBP16.05■□□□□ 0.16
PMPCB-204ENST00000444457 DAZAP2Q15038 168 aaPredicted RBP16.05■□□□□ 0.16
PMPCB-204ENST00000444457 KCNIP4Q6PIL6 250 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 OR2J1Q9GZK6 312 aa16.05■□□□□ 0.16
PMPCB-204ENST00000444457 FBXW9Q5XUX1 488 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 MRPL30Q8TCC3 161 aaKnown RBP16.04■□□□□ 0.16
PMPCB-204ENST00000444457 LHX4Q969G2 390 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 HES7Q9BYE0 225 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 PARD6AQ9NPB6 346 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 H0Y980 276 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 NUPR1O60356 82 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 OR7C1O76099 320 aaPredicted RBP16.04■□□□□ 0.16
PMPCB-204ENST00000444457 CD82P27701 267 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 CLDN18P56856 261 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 C9orf135Q5VTT2 229 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 Q6ZS49 121 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 BATF2Q8N1L9 274 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 PLK3Q9H4B4 646 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 ZNF442Q9H7R0 627 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 FOXJ2Q9P0K8 574 aa16.04■□□□□ 0.16
PMPCB-204ENST00000444457 AHCTF1Q8WYP5 2266 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 A0A0G2JRQ6 117 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 GYPAP02724 150 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 SLC25A6P12236 298 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 IL3RAP26951 378 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 MPLP40238 635 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 RANP62826 216 aaKnown RBP16.03■□□□□ 0.16
PMPCB-204ENST00000444457 ARL16Q0P5N6 197 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 ABHD17BQ5VST6 288 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 OR56B2PQ8NGI1 322 aa16.03■□□□□ 0.16
PMPCB-204ENST00000444457 PARD6GQ9BYG4 376 aaPredicted RBP16.03■□□□□ 0.16
PMPCB-204ENST00000444457 RIMS4Q9H426 269 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms