RNA–Protein interactions for RNA: ENST00000380749.9

HMGN1-204, Transcript of high mobility group nucleosome binding domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN1, Length 1,383 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-204ENST00000380749 TM2D1Q9BX74 207 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 KLK15Q9H2R5 256 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 SLC23A1Q9UHI7 598 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 SCOCQ9UIL1 159 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 U3KQK5 164 aa13.42□□□□□ -0.26
HMGN1-204ENST00000380749 OR5H14A6NHG9 310 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 CASQ2O14958 399 aaPredicted RBP13.41□□□□□ -0.26
HMGN1-204ENST00000380749 ST8SIA5O15466 376 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 NAPSAO96009 420 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 UNC119Q13432 240 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 PLGLAQ15195 96 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 RNLSQ5VYX0 342 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 LRRTM1Q86UE6 522 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 TCTEX1D1Q8N7M0 179 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 OR6M1Q8NGM8 313 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 OR5B12Q96R08 314 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 NICN1Q9BSH3 213 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 PLEKHJ1Q9NW61 149 aa13.41□□□□□ -0.26
HMGN1-204ENST00000380749 TNCP24821 2201 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 SLC22A1O15245 554 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 LY86O95711 162 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 BPNT1O95861 308 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 RAB9AP51151 201 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 GNB1P62873 340 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 MED22Q15528 200 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 ASPHD1Q5U4P2 390 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 ZNF880Q6PDB4 577 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 ABHD5Q8WTS1 349 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 EDARADDQ8WWZ3 215 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 URM1Q9BTM9 101 aaKnown RBP13.4□□□□□ -0.26
HMGN1-204ENST00000380749 GHITMQ9H3K2 345 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 RIMS4Q9H426 269 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-204ENST00000380749 KCNK15Q9H427 330 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 ISYNA1Q9NPH2 558 aa13.4□□□□□ -0.26
HMGN1-204ENST00000380749 FOXA2Q9Y261 457 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-204ENST00000380749 A0A1W2PN81 502 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 TMEM14DPA8MWL7 114 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 H7C2Y5 167 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 RRHO14718 337 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 RBBP9O75884 186 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 SRMP19623 302 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 CHRNA7P36544 502 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 NDPQ00604 133 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 KIAA0141Q14154 515 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-204ENST00000380749 SPHARQ15513 63 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 RPL39P5Q59GN2 51 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 ZNF660Q6AZW8 331 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-204ENST00000380749 CEACAM19Q7Z692 300 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 MINDY2Q8NBR6 621 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 UFD1Q92890 307 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 FBXL15Q9H469 300 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 SCN3BQ9NY72 215 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 MGAT4AQ9UM21 535 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 WASHC3Q9Y3C0 194 aa13.39□□□□□ -0.27
HMGN1-204ENST00000380749 PTGES3LE9PB15 166 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 ITGB1BP1O14713 200 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 OVOL1O14753 267 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 HSPA12AO43301 675 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 GSTP1P09211 210 aaKnown RBP13.38□□□□□ -0.27
HMGN1-204ENST00000380749 UCHL1P09936 223 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 MC5RP33032 325 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 CRIP2P52943 208 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-204ENST00000380749 HLA-DRB3P79483 266 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 PYHIN1Q6K0P9 492 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 ZNF429Q86V71 674 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 PLGRKTQ9HBL7 147 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 RNF150Q9ULK6 438 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 LSM2Q9Y333 95 aaKnown RBP13.38□□□□□ -0.27
HMGN1-204ENST00000380749 A3GALT2U3KPV4 340 aa13.38□□□□□ -0.27
HMGN1-204ENST00000380749 TRBV6-6A0A0A6YYG2 114 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 H0YJW9 148 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 CT45A6P0DMU7 189 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 CT45A5P0DMU8 189 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 CT45A7P0DMV0 189 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 ZBTB25P24278 435 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 TMEM267Q0VDI3 215 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-204ENST00000380749 GLDNQ6ZMI3 551 aaPredicted RBP13.37□□□□□ -0.27
HMGN1-204ENST00000380749 DCUN1D4Q92564 292 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 ABHD14BQ96IU4 210 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 C12orf4Q9NQ89 552 aa13.37□□□□□ -0.27
HMGN1-204ENST00000380749 SACSQ9NZJ4 4579 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 A0A0A6YYD4 124 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 LINC01619G3V211 115 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 SAP30O75446 220 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 LGALS1P09382 135 aaKnown RBP13.36□□□□□ -0.27
HMGN1-204ENST00000380749 ARSBP15848 533 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 CX3CL1P78423 397 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 QRFPP83859 136 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 P2RY14Q15391 338 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 C19orf54Q5BKX5 351 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 LIPKQ5VXJ0 399 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 PARP12Q9H0J9 701 aaKnown RBP13.36□□□□□ -0.27
HMGN1-204ENST00000380749 LPAR5Q9H1C0 372 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 AK3Q9UIJ7 227 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 FBXO7Q9Y3I1 522 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 SMAD5-AS1Q9Y6J3 95 aa13.36□□□□□ -0.27
HMGN1-204ENST00000380749 SLC17A2O00624 439 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 SOCS1O15524 211 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 ARL6IP5O75915 188 aa13.35□□□□□ -0.27
HMGN1-204ENST00000380749 CD40LGP29965 261 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms