RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 MDH2P40926 338 aaKnown RBP15.3■□□□□ 0.04
SF1-203ENST00000377387 PYY3Q5JQD4 70 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 DHRS13Q6UX07 377 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 BTNL3Q6UXE8 466 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 LINC00596Q86U02 117 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 NECAP1Q8NC96 275 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 OR10D4PQ8NGN7 298 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 GTF3AQ92664 365 aaKnown RBP15.3■□□□□ 0.04
SF1-203ENST00000377387 BCL2L2Q92843 193 aaPredicted RBP15.3■□□□□ 0.04
SF1-203ENST00000377387 PLPPR2Q96GM1 343 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 GPR61Q9BZJ8 451 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 TMEM9BQ9NQ34 198 aa15.3■□□□□ 0.04
SF1-203ENST00000377387 DEFA4P12838 97 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 S100A2P29034 98 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 OR3A1P47881 315 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 PMP22Q01453 160 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 C9orf152Q5JTZ5 239 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 RNFT1Q5M7Z0 435 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 TMEM164Q5U3C3 297 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 FBXW9Q5XUX1 488 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 ZNF497Q6ZNH5 498 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 SLC35E3Q7Z769 313 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 RBKSQ9H477 322 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 CLN8Q9UBY8 286 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 TINAGQ9UJW2 476 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 FZR1Q9UM11 496 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 A0A087WWC5 75 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 TRBV6-6A0A0A6YYG2 114 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 RBMXL2O75526 392 aaKnown RBP15.29■□□□□ 0.04
SF1-203ENST00000377387 HBG1P69891 147 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 HBG2P69892 147 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 OR52L2PQ8NGH6 319 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 OR2D2Q9H210 308 aa15.29■□□□□ 0.04
SF1-203ENST00000377387 MAP1LC3B2A6NCE7 125 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 PSPNO60542 156 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 S100PP25815 95 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 PPP1CBP62140 327 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 AESQ08117 197 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 SLC38A11Q08AI6 406 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 TBC1D28Q2M2D7 210 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 SLC25A40Q8TBP6 338 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 LHX4Q969G2 390 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 FAM210BQ96KR6 192 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 SPRY4Q9C004 299 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 PKIBQ9C010 78 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 MAP1LC3BQ9GZQ8 125 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 SLC25A22Q9H936 323 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 SLC39A9Q9NUM3 307 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 LIN7CQ9NUP9 197 aaKnown RBP15.28■□□□□ 0.04
SF1-203ENST00000377387 UFSP2Q9NUQ7 469 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.28■□□□□ 0.04
SF1-203ENST00000377387 CDX1P47902 265 aaPredicted RBP15.28■□□□□ 0.04
SF1-203ENST00000377387 LTC4SQ16873 150 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 LRRC75BQ2VPJ9 315 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 LSM10Q969L4 123 aaKnown RBP15.28■□□□□ 0.04
SF1-203ENST00000377387 ZPBPQ9BS86 351 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 OPA3Q9H6K4 179 aa15.28■□□□□ 0.04
SF1-203ENST00000377387 IGHV3-43A0A0B4J1X8 118 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 IGKV1D-33P01593 117 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 IGKV1-33P01594 117 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 IGHV3-43DP0DP04 118 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 NKX6-1P78426 367 aaPredicted RBP15.27■□□□□ 0.04
SF1-203ENST00000377387 RFESDQ8TAC1 157 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 CA5BP1Q8WTZ4 195 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 FRZBQ92765 325 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 RPUSD4Q96CM3 377 aaKnown RBP15.27■□□□□ 0.04
SF1-203ENST00000377387 WDR61Q9GZS3 305 aaKnown RBP15.27■□□□□ 0.04
SF1-203ENST00000377387 CDH20Q9HBT6 801 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 OBP2BQ9NPH6 170 aa15.27■□□□□ 0.04
SF1-203ENST00000377387 GAR1Q9NY12 217 aaKnown RBP15.27■□□□□ 0.04
SF1-203ENST00000377387 DEFB108AA8MXU0 73 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 SH2D1BO14796 132 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 SOD3P08294 240 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 TRGC1P0CF51 173 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 TUBG1P23258 451 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 RPL30P62888 115 aaKnown RBP15.27■□□□□ 0.03
SF1-203ENST00000377387 ADIRFQ15847 76 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 SPRR3Q9UBC9 169 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 CADP27708 2225 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 HEATR1Q9H583 2144 aaKnown RBP15.27■□□□□ 0.03
SF1-203ENST00000377387 ZNF737O75373 536 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 ARG2P78540 354 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 DPPA3Q6W0C5 159 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 GATAD1Q8WUU5 269 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 NANOS1Q8WY41 292 aaKnown RBP15.27■□□□□ 0.03
SF1-203ENST00000377387 TAF15Q92804 592 aaKnown RBP eCLIP15.27■□□□□ 0.031e-8■■□□□ 12.7
SF1-203ENST00000377387 IER2Q9BTL4 223 aa15.27■□□□□ 0.03
SF1-203ENST00000377387 CISD1Q9NZ45 108 aaKnown RBP15.27■□□□□ 0.03
SF1-203ENST00000377387 SMG1Q96Q15 3661 aaKnown RBP15.26■□□□□ 0.03
SF1-203ENST00000377387 KLRC4-KLRK1H3BQV0 150 aa15.26■□□□□ 0.03
SF1-203ENST00000377387 AGFG2O95081 481 aa15.26■□□□□ 0.03
SF1-203ENST00000377387 IL2RGP31785 369 aa15.26■□□□□ 0.03
SF1-203ENST00000377387 UBE2NP61088 152 aaKnown RBP15.26■□□□□ 0.03
SF1-203ENST00000377387 WDR25Q64LD2 544 aaPredicted RBP15.26■□□□□ 0.03
SF1-203ENST00000377387 ALKBH2Q6NS38 261 aa15.26■□□□□ 0.03
SF1-203ENST00000377387 OR5T1Q8NG75 326 aa15.26■□□□□ 0.03
SF1-203ENST00000377387 ABHD5Q8WTS1 349 aa15.26■□□□□ 0.03
SF1-203ENST00000377387 ZDHHC16Q969W1 377 aa15.26■□□□□ 0.03
SF1-203ENST00000377387 RIF1Q5UIP0 2472 aaKnown RBP15.26■□□□□ 0.03
SF1-203ENST00000377387 LRP5LA4QPB2 252 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms