RNA–Protein interactions for RNA: ENST00000373382.5

VPS26A-202, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene VPS26A, Length 3,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-202ENST00000373382 RPL29P47914 159 aaKnown RBP15.07■□□□□ 0
VPS26A-202ENST00000373382 SERF2P84101 59 aa15.07■□□□□ 0
VPS26A-202ENST00000373382 CEACAM21Q3KPI0 293 aa15.07■□□□□ 0
VPS26A-202ENST00000373382 P2RX4Q99571 388 aa15.07■□□□□ 0
VPS26A-202ENST00000373382 C1QTNF5Q9BXJ0 243 aa15.07■□□□□ 0
VPS26A-202ENST00000373382 PDGFBP01127 241 aaPredicted RBP15.06■□□□□ 0
VPS26A-202ENST00000373382 BATFQ16520 125 aa15.06■□□□□ 0
VPS26A-202ENST00000373382 FAM58AQ8N1B3 248 aa15.06■□□□□ 0
VPS26A-202ENST00000373382 IMMP1LQ96LU5 166 aa15.06■□□□□ 0
VPS26A-202ENST00000373382 DLL3Q9NYJ7 618 aa15.06■□□□□ 0
VPS26A-202ENST00000373382 ZNF705AQ6ZN79 300 aaPredicted RBP15.06■□□□□ 0
VPS26A-202ENST00000373382 FGFRL1Q8N441 504 aa15.06■□□□□ 0
VPS26A-202ENST00000373382 PINX1Q96BK5 328 aaKnown RBP15.06■□□□□ 0
VPS26A-202ENST00000373382 REPIN1Q9BWE0 567 aaKnown RBP15.06■□□□□ 0
VPS26A-202ENST00000373382 ZNF503-AS2A6NEH8 195 aa15.05■□□□□ 0
VPS26A-202ENST00000373382 MCEMP1Q8IX19 187 aa15.05■□□□□ 0
VPS26A-202ENST00000373382 ZNF709Q8N972 641 aa15.05■□□□□ 0
VPS26A-202ENST00000373382 C2orf88Q9BSF0 95 aa15.05■□□□□ 0
VPS26A-202ENST00000373382 TMEM9BQ9NQ34 198 aa15.05■□□□□ 0
VPS26A-202ENST00000373382 HRASP01112 189 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 HOXA4Q00056 320 aaPredicted RBP15.05■□□□□ -0
VPS26A-202ENST00000373382 TFF3Q07654 80 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 TUSC5Q8IXB3 177 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 IL22RA2Q969J5 263 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 ANKRD30BLA7E2S9 258 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 TOX3O15405 576 aaPredicted RBP15.05■□□□□ -0
VPS26A-202ENST00000373382 IL18BPO95998 194 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 CFIP05156 583 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 B3GALT5-AS1P59052 145 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 ZDHHC16Q969W1 377 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 PLPPR2Q96GM1 343 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 TECTBQ96PL2 329 aa15.05■□□□□ -0
VPS26A-202ENST00000373382 PSMG3Q9BT73 122 aaPredicted RBP15.05■□□□□ -0
VPS26A-202ENST00000373382 RAMP3O60896 148 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 FGF5P12034 268 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 SRD5A2P31213 254 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 TEX38Q6PEX7 206 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 TMEM256Q8N2U0 113 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 RAB24Q969Q5 203 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 NOL4LQ96MY1 436 aaPredicted RBP15.04■□□□□ -0
VPS26A-202ENST00000373382 SVILO95425 2214 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 LINC00205P59089 165 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 SPCS3P61009 180 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 ZNF585BQ52M93 769 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 SPINK14Q6IE38 97 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 BTNL3Q6UXE8 466 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 AGBL5Q8NDL9 886 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 GRIFINA4D1Z8 144 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 KLF7O75840 302 aaPredicted RBP15.04■□□□□ -0
VPS26A-202ENST00000373382 MPLP40238 635 aa15.04■□□□□ -0
VPS26A-202ENST00000373382 CEBPDP49716 269 aaPredicted RBP15.04■□□□□ -0
VPS26A-202ENST00000373382 MED12LQ86YW9 2145 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 MKRN2OSH3BPM6 223 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 C3AR1Q16581 482 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 GCSAMLQ5JQS6 135 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 TCF23Q7RTU1 214 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 OR5P3Q8WZ94 311 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 DERL1Q9BUN8 251 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 PRDM14Q9GZV8 571 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 DEPPQ9NTK1 212 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 FKBP11Q9NYL4 201 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 TRAPPC1Q9Y5R8 145 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 C11orf94C9JXX5 98 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 SNHG12Q9BXW3 62 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 ACTR3CQ9C0K3 210 aaPredicted RBP15.03■□□□□ -0
VPS26A-202ENST00000373382 C12orf49Q9H741 205 aa15.03■□□□□ -0
VPS26A-202ENST00000373382 MAP1BP46821 2468 aaKnown RBP15.03■□□□□ -0
VPS26A-202ENST00000373382 PINLYPA6NC86 204 aa15.02■□□□□ -0
VPS26A-202ENST00000373382 ZNF25P17030 456 aaPredicted RBP15.02■□□□□ -0
VPS26A-202ENST00000373382 LTC4SQ16873 150 aa15.02■□□□□ -0
VPS26A-202ENST00000373382 TP53TG5Q9Y2B4 290 aa15.02■□□□□ -0
VPS26A-202ENST00000373382 PRR14LQ5THK1 2151 aa15.02■□□□□ -0
VPS26A-202ENST00000373382 FAM166BA8MTA8 275 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 ZG16O60844 167 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 CELA3AP09093 270 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 EPHA8P29322 1005 aaPredicted RBP15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FOLR3P41439 243 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 CNN1P51911 297 aaKnown RBP15.02□□□□□ -0.01
VPS26A-202ENST00000373382 NUTF2P61970 127 aaKnown RBP15.02□□□□□ -0.01
VPS26A-202ENST00000373382 PLP2Q04941 152 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 IQCJQ1A5X6 159 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 DRAM1Q8N682 238 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 TMEM170AQ8WVE7 144 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 APOBEC3DQ96AK3 386 aaPredicted RBP15.02□□□□□ -0.01
VPS26A-202ENST00000373382 PATZ1Q9HBE1 687 aaKnown RBP15.02□□□□□ -0.01
VPS26A-202ENST00000373382 LIN7CQ9NUP9 197 aaKnown RBP15.02□□□□□ -0.01
VPS26A-202ENST00000373382 IL17BQ9UHF5 180 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 TRAV38-1A0A0B4J264 116 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A10PA6NDY2 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A18PA6NE21 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A16PA6NEW6 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A20PA6NIJ5 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A8PA6NJQ4 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A7PA6NKC0 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A22PA8MWA6 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A12PA8MX19 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A5PA8MXJ8 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A23PA8MXZ1 464 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 GCGP01275 180 aa15.02□□□□□ -0.01
VPS26A-202ENST00000373382 FAM90A15PP0C7V4 464 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms