RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 GAB4Q2WGN9 574 aa14.02□□□□□ -0.17
SSRP1-202ENST00000293880 IGKV1D-16P01601 117 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 ZNF273Q14593 569 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 SLC25A34Q6PIV7 304 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 LURAP1LQ8IV03 231 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 MRPL18Q9H0U6 180 aaKnown RBP14.01□□□□□ -0.17
SSRP1-202ENST00000293880 PRNDQ9UKY0 176 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 CTXND1A0A1B0GTU2 59 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 FCGR3AP08637 254 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 SSTR5P35346 364 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 TMEM52Q8NDY8 209 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 WDR34Q96EX3 536 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 RREB1Q92766 1687 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 TRIP6Q15654 476 aaKnown RBP14.01□□□□□ -0.17
SSRP1-202ENST00000293880 KCNMB2Q9Y691 235 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 A0A1B0GU03 582 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 MOSPD3O75425 235 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 DRD3P35462 400 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 SFTA2Q6UW10 78 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 OR52M1Q8NGK5 317 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 LEAP2Q969E1 77 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 A0A1B0GWB2 263 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 IBA57Q5T440 356 aaKnown RBP14.01□□□□□ -0.17
SSRP1-202ENST00000293880 PQLC2Q6ZP29 291 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 SFRP2Q96HF1 295 aa14.01□□□□□ -0.17
SSRP1-202ENST00000293880 ZNF385AQ96PM9 386 aaKnown RBP14.01□□□□□ -0.17
SSRP1-202ENST00000293880 SCTP09683 121 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 PEBP1P30086 187 aaKnown RBP14□□□□□ -0.17
SSRP1-202ENST00000293880 C9orf40Q8IXQ3 194 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 CADM4Q8NFZ8 388 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 VSTM2AQ8TAG5 236 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 RAB1CQ92928 201 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 CCL13Q99616 98 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 COL25A1Q9BXS0 654 aaPredicted RBP14□□□□□ -0.17
SSRP1-202ENST00000293880 COLQQ9Y215 455 aaPredicted RBP14□□□□□ -0.17
SSRP1-202ENST00000293880 IFITM3Q01628 133 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 REC114Q7Z4M0 266 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 OR4B1Q8NGF8 309 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 NUDT16L1Q9BRJ7 211 aaKnown RBP14□□□□□ -0.17
SSRP1-202ENST00000293880 CELA2AP08217 269 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 BCL2P10415 239 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 VDAC1P21796 283 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 A0A1W2PP11 408 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 TSPAN2O60636 221 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 CKS1BP61024 79 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 STXBP6Q8NFX7 210 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 MEGF9Q9H1U4 602 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 C16orf92Q96LL3 132 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 RAXQ9Y2V3 346 aa14□□□□□ -0.17
SSRP1-202ENST00000293880 HSPB1P04792 205 aaKnown RBP13.99□□□□□ -0.17
SSRP1-202ENST00000293880 C19orf54Q5BKX5 351 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 STRCQ7RTU9 1775 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 AMY1AP04745 511 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 HKR1P10072 659 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 PRSS27Q9BQR3 290 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 ALKBH7Q9BT30 221 aaPredicted RBP13.99□□□□□ -0.17
SSRP1-202ENST00000293880 CEACAM18A8MTB9 384 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 H0YL77 283 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 RAC3P60763 192 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 TCFL5Q9UL49 500 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 KIAA1551Q9HCM1 1747 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 GLULP15104 373 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 PLPPR5Q32ZL2 321 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 PRDM14Q9GZV8 571 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 FCGR2BP31994 310 aaPredicted RBP13.99□□□□□ -0.17
SSRP1-202ENST00000293880 COX14Q96I36 57 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 CLDN16Q9Y5I7 305 aa13.99□□□□□ -0.17
SSRP1-202ENST00000293880 AKAP11Q9UKA4 1901 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 ADRA2AP08913 450 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 SMIM13P0DJ93 91 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 ZNF324BQ6AW86 544 aaPredicted RBP13.98□□□□□ -0.17
SSRP1-202ENST00000293880 FAM53AQ6NSI3 398 aaPredicted RBP13.98□□□□□ -0.17
SSRP1-202ENST00000293880 C1orf210Q8IVY1 113 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 ZNF441Q8N8Z8 693 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 CITED1Q99966 193 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 DNAJC4Q9NNZ3 241 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 DMRT1Q9Y5R6 373 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 LEPROTL1O95214 131 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 IRF3Q14653 427 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 VKORC1L1Q8N0U8 176 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 LINC00470Q9BZP3 86 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 WNT5BQ9H1J7 359 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 ERVH48-1M5A8F1 160 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 IL4P05112 153 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 CKS2P33552 79 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 MAS1LP35410 378 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 ID1P41134 155 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 NXPH1P58417 271 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 MIC13Q5XKP0 118 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 TMEM211Q6ICI0 200 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 HOGA1Q86XE5 327 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 IGHV3-23P01764 117 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 IGHV5-10-1A0A0J9YXX1 117 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 OR13C6PQ8NH95 151 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 NRIP2Q9BQI9 281 aa13.98□□□□□ -0.17
SSRP1-202ENST00000293880 MRPL16Q9NX20 251 aaKnown RBP13.98□□□□□ -0.17
SSRP1-202ENST00000293880 LGALS3P17931 250 aaKnown RBP13.97□□□□□ -0.17
SSRP1-202ENST00000293880 ANAPC13Q9BS18 74 aa13.97□□□□□ -0.17
SSRP1-202ENST00000293880 METTL1Q9UBP6 276 aaKnown RBP13.97□□□□□ -0.17
SSRP1-202ENST00000293880 TRA2AQ13595 282 aaKnown RBP eCLIP13.97□□□□□ -0.178e-7■■□□□ 11.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms