RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 VWA1Q6PCB0 445 aa14.19□□□□□ -0.14
SSPN-201ENST00000242729 CLEC18CQ8NCF0 446 aa14.19□□□□□ -0.14
SSPN-201ENST00000242729 MUCL1Q96DR8 90 aa14.19□□□□□ -0.14
SSPN-201ENST00000242729 SSX3Q99909 188 aa14.19□□□□□ -0.14
SSPN-201ENST00000242729 NIPSNAP3BQ9BS92 247 aa14.19□□□□□ -0.14
SSPN-201ENST00000242729 GP6Q9HCN6 339 aa14.19□□□□□ -0.14
SSPN-201ENST00000242729 A0A1B0GU03 582 aa14.18□□□□□ -0.14
SSPN-201ENST00000242729 CEBPZOSA8MTT3 80 aa14.18□□□□□ -0.14
SSPN-201ENST00000242729 HAND1O96004 215 aa14.18□□□□□ -0.14
SSPN-201ENST00000242729 S100A9P06702 114 aaKnown RBP14.18□□□□□ -0.14
SSPN-201ENST00000242729 MMP9P14780 707 aa14.18□□□□□ -0.14
SSPN-201ENST00000242729 C5orf30Q96GV9 206 aa14.18□□□□□ -0.14
SSPN-201ENST00000242729 RIMS4Q9H426 269 aaPredicted RBP14.18□□□□□ -0.14
SSPN-201ENST00000242729 GFI1BQ5VTD9 330 aa14.18□□□□□ -0.14
SSPN-201ENST00000242729 KLF14Q8TD94 323 aaPredicted RBP14.18□□□□□ -0.14
SSPN-201ENST00000242729 PRSS44E7EML9 344 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 UBE2CO00762 179 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 IL2RGP31785 369 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 RAB2AP61019 212 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 HEPN1Q6WQI6 88 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 ZNF525Q8N782 197 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 GATAD1Q8WUU5 269 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 NANOS1Q8WY41 292 aaKnown RBP14.17□□□□□ -0.14
SSPN-201ENST00000242729 OR5H1A6NKK0 313 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 C12orf77C9JDV5 145 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 SH2D1BO14796 132 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 MLNRO43193 412 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 COL8A2P25067 703 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 GLIPR1P48060 266 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 RNF212Q495C1 297 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 CDPF1Q6NVV7 123 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 ZNF880Q6PDB4 577 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 NECAP1Q8NC96 275 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 RCC1LQ96I51 464 aaKnown RBP14.17□□□□□ -0.14
SSPN-201ENST00000242729 CABLES2Q9BTV7 478 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 IFT22Q9H7X7 185 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 SLC25A22Q9H936 323 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 TMEM9BQ9NQ34 198 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 S1PR2O95136 353 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 CD200P41217 278 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 FOXF2Q12947 444 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 ELOBQ15370 118 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 SSX9Q7RTT3 188 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 RAB40CQ96S21 281 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 PKIBQ9C010 78 aa14.17□□□□□ -0.14
SSPN-201ENST00000242729 LRP5LA4QPB2 252 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 C17orf98A8MV24 154 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 IGKV1D-33P01593 117 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 IGKV1-33P01594 117 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 TRGC2P03986 189 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 SRSF7Q16629 238 aaKnown RBP eCLIP14.16□□□□□ -0.14
SSPN-201ENST00000242729 OR5T1Q8NG75 326 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 GTF3AQ92664 365 aaKnown RBP14.16□□□□□ -0.14
SSPN-201ENST00000242729 FER1L6-AS2Q96M78 137 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 RBKSQ9H477 322 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 TACC2O95359 2948 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 ST8SIA5O15466 376 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 DFFBO76075 338 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 PGA5P0DJD9 388 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 SPNS3Q6ZMD2 512 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 TCTEX1D2Q8WW35 142 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 TVP23CQ96ET8 276 aa14.16□□□□□ -0.14
SSPN-201ENST00000242729 DUXBA0A1W2PPF3 345 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 PTBP3O95758 552 aaKnown RBP14.15□□□□□ -0.14
SSPN-201ENST00000242729 ZNF506Q5JVG8 444 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 TUBA4BQ9H853 241 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.15□□□□□ -0.14
SSPN-201ENST00000242729 AP4M1O00189 453 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 HBZP02008 142 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 FABP1P07148 127 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 PAX6P26367 422 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 SLC38A11Q08AI6 406 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 FDCSPQ8NFU4 85 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 IL22RA2Q969J5 263 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 LIN7CQ9NUP9 197 aaKnown RBP14.15□□□□□ -0.14
SSPN-201ENST00000242729 POLDIP2Q9Y2S7 368 aa14.15□□□□□ -0.14
SSPN-201ENST00000242729 PCNX1Q96RV3 2341 aa14.15□□□□□ -0.15
SSPN-201ENST00000242729 RELNP78509 3460 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 PLCE1Q9P212 2302 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 LOC102723971A0A1B0GUV8 181 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 SOX15O60248 233 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 ZG16O60844 167 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 IGHV2-5P01817 119 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 ERVK11-1P61568 191 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 RPUSD4Q96CM3 377 aaKnown RBP14.14□□□□□ -0.15
SSPN-201ENST00000242729 GSN-AS1Q9NRJ2 163 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 MIOXQ9UGB7 285 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 M0R296 226 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 TIMM8AO60220 97 aaPredicted RBP14.14□□□□□ -0.15
SSPN-201ENST00000242729 IFNA17P01571 189 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 MRPL49Q13405 166 aaKnown RBP14.14□□□□□ -0.15
SSPN-201ENST00000242729 WDR25Q64LD2 544 aaPredicted RBP14.14□□□□□ -0.15
SSPN-201ENST00000242729 LINC00596Q86U02 117 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 VKORC1L1Q8N0U8 176 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 GALMQ96C23 342 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 OPA3Q9H6K4 179 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 KCNIP1Q9NZI2 227 aa14.14□□□□□ -0.15
SSPN-201ENST00000242729 TRAV20A0A0B4J274 112 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 MAP1LC3B2A6NCE7 125 aa14.13□□□□□ -0.15
SSPN-201ENST00000242729 HSPB1P04792 205 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms