RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	WNT5B	Q9H1J7	359 aa		6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	PLEKHF2	Q9H8W4	249 aa		6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	UNKL	Q9H9P5	680 aa	Known RBP	6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	ELL3	Q9HB65	397 aa	Predicted RBP	6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	TMEM38B	Q9NVV0	291 aa		6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	PLEK2	Q9NYT0	353 aa		6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	TREM2	Q9NZC2	230 aa		6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	RFNG	Q9Y644	331 aa		6.65	□□□□□ -1.34
SPIDR-223	ENST00000524033	MED12	Q93074	2177 aa		6.65	□□□□□ -1.35
SPIDR-223	ENST00000524033	POLE	Q07864	2286 aa		6.65	□□□□□ -1.35
SPIDR-223	ENST00000524033	CREBBP	Q92793	2442 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033		A0A0J9YW62	118 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	C3orf85	A0A1B0GTC6	90 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	NPIPA3	F8WFD2	350 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	WRB	O00258	174 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	TP53I11	O14683	189 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF205	O95201	554 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	TMEM50A	O95807	157 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	NAPSA	O96009	420 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	NRAS	P01111	189 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	HBE1	P02100	147 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	PRH1	P02810	166 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	CXCL1	P09341	107 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	PAX1	P15863	534 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	GNRHR	P30968	328 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	NKX2-1	P43699	371 aa	Predicted RBP	6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	RBP2	P50120	134 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	FUT6	P51993	359 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	PAX9	P55771	341 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	DSCR4	P56555	118 aa	Predicted RBP	6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	B3GALT5-AS1	P59052	145 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	HERV-K104	P61576	105 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	GNMT	Q14749	295 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	CDSN	Q15517	529 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	OR8G1	Q15617	311 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	KHDC3L	Q587J8	217 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	IGSF11	Q5DX21	431 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	NCMAP	Q5T1S8	102 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	ADAM5	Q6NVV9	412 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	SLC35E3	Q7Z769	313 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	DPPA2	Q7Z7J5	298 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	SAXO1	Q8IYX7	474 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF610	Q8N9Z0	462 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZFP62	Q8NB50	900 aa	Predicted RBP	6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	OR2G3	Q8NGZ4	309 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	AKR7L	Q8NHP1	331 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	FAM57A	Q8TBR7	257 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	CD300LF	Q8TDQ1	290 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	CA5BP1	Q8WTZ4	195 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	GNPNAT1	Q96EK6	184 aa	Predicted RBP	6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	BORCS8	Q96FH0	119 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	PAPOLG	Q9BWT3	736 aa	Known RBP	6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	BCL2L14	Q9BZR8	327 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	FGF23	Q9GZV9	251 aa	Predicted RBP	6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	SLC25A31	Q9H0C2	315 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	TOLLIP	Q9H0E2	274 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	DEFB127	Q9H1M4	99 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	CALHM2	Q9HA72	323 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033		Q9N2K0	584 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	DOK5	Q9P104	306 aa		6.64	□□□□□ -1.35
SPIDR-223	ENST00000524033	VPS13C	Q709C8	3753 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	TRBV23-1	A0A0A0MS06	115 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	TRBV6-6	A0A0A6YYG2	114 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	IGHV3-15	A0A0B4J1V0	119 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	FAM230A	A0A1W2PPH8	454 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF716	A6NP11	495 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	SEC14L6	B5MCN3	397 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033		H0YL77	283 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	C19orf84	I3L1E1	186 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	TGOLN2	O43493	480 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	CCL3	P10147	92 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	SLC25A6	P12236	298 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF32	P17041	273 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	FUT3	P21217	361 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	GUCA1A	P43080	201 aa	Predicted RBP	6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	GLIPR1	P48060	266 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	NPBWR2	P48146	333 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	DYNLT3	P51808	116 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	TAS2R30	P59541	319 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	OR2B8P	P59922	312 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	CD81	P60033	236 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	ERVFRD-1	P60508	538 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	RAB2A	P61019	212 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	PLGLB1	Q02325	96 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF92	Q03936	586 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	FOXO1	Q12778	655 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	IL24	Q13007	206 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	MALL	Q13021	153 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIVEP3	Q5T1R4	2406 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	PRAMEF20	Q5VT98	475 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	FAM90A2P	Q658T7	463 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	ZNF774	Q6NX45	483 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	COLCA1	Q6ZS62	124 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	TBC1D26	Q86UD7	250 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	HIST3H2BB	Q8N257	126 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	RBMXL1	Q96E39	390 aa	Known RBP	6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	TVP23C	Q96ET8	276 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	LURAP1	Q96LR2	239 aa		6.63	□□□□□ -1.35
SPIDR-223	ENST00000524033	ATP5S	Q99766	215 aa		6.63	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms