RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 OR1L6Q8NGR2 347 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 OR1K1Q8NGR3 316 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 MS4A3Q96HJ5 214 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 CEP250Q9BV73 2442 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 DICER1Q9UPY3 1922 aaKnown RBP14.04□□□□□ -0.16
USP42-207ENST00000521713 RBP4P02753 201 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 PMELP40967 661 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 REC114Q7Z4M0 266 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 TEX29Q8N6K0 151 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 ZPLD1Q8TCW7 415 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 TXNDC17Q9BRA2 123 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 TECRQ9NZ01 308 aaKnown RBP14.04□□□□□ -0.16
USP42-207ENST00000521713 NAGKQ9UJ70 344 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 ICE1Q9Y2F5 2266 aa14.04□□□□□ -0.16
USP42-207ENST00000521713 IGKV3D-11A0A0A0MRZ8 115 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 SERF2P84101 59 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 CCDC144NLQ6NUI1 221 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 ACSM6Q6P461 480 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 BPIFA4PQ86YQ2 179 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 ZBTB34Q8NCN2 500 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 GRAMD2BQ96HH9 432 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 KCNE5Q9UJ90 142 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 SH2D7A6NKC9 451 aaPredicted RBP14.03□□□□□ -0.16
USP42-207ENST00000521713 COX5BP10606 129 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 CCL8P80075 99 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 TMEM204Q9BSN7 226 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 CISD1Q9NZ45 108 aaKnown RBP14.03□□□□□ -0.16
USP42-207ENST00000521713 ST6GALNAC2Q9UJ37 374 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 PAM16Q9Y3D7 125 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 GDF9O60383 454 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 ROM1Q03395 351 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 CEACAM21Q3KPI0 293 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 MISP3Q96FF7 219 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 WIPI2Q9Y4P8 454 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 KCNMB2Q9Y691 235 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 A0A1W2PRD5 423 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 A0A1W2PRF3 423 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 A0A1W2PRM7 423 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 DIRC3C9JPN6 131 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 EIF3GO75821 320 aaKnown RBP eCLIP14.03□□□□□ -0.16
USP42-207ENST00000521713 ZNF205O95201 554 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 GOSR1O95249 250 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 C1QCP02747 245 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 SLC25A5P05141 298 aaKnown RBP14.03□□□□□ -0.16
USP42-207ENST00000521713 B2MP61769 119 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 ZNF362Q5T0B9 420 aaPredicted RBP14.03□□□□□ -0.16
USP42-207ENST00000521713 LDLRAD3Q86YD5 345 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 DOLPP1Q86YN1 238 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 ADAT3Q96EY9 351 aaPredicted RBP14.03□□□□□ -0.16
USP42-207ENST00000521713 LRFN3Q9BTN0 628 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 PIPOXQ9P0Z9 390 aa14.03□□□□□ -0.16
USP42-207ENST00000521713 A0A1B0GU03 582 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 ZNF785A8K8V0 405 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 BCL2P10415 239 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 RPL31P62899 125 aaKnown RBP14.02□□□□□ -0.16
USP42-207ENST00000521713 C19orf48Q6RUI8 117 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 EIF4E3Q8N5X7 224 aaKnown RBP14.02□□□□□ -0.16
USP42-207ENST00000521713 INSIG2Q9Y5U4 225 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 A0A0G2JMZ2 1700 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 LRRC37A2A6NM11 1700 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 TRAV8-7A0A075B6U6 113 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 NPIPB13A6NJU9 1138 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 NPIPB4C9JG80 1138 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 MS4A18H0YCH9 400 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 GCM2O75603 506 aaPredicted RBP14.02□□□□□ -0.16
USP42-207ENST00000521713 MS4A18Q3C1V0 323 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 VAX1Q5SQQ9 334 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 MRPL24Q96A35 216 aaKnown RBP14.02□□□□□ -0.16
USP42-207ENST00000521713 ZDHHC8Q9ULC8 765 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 RNF115Q9Y4L5 304 aa14.02□□□□□ -0.16
USP42-207ENST00000521713 SIAH2O43255 324 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 CHST1O43916 411 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 VSIG8P0DPA2 414 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 PMCHL1Q16048 86 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 TBC1D26Q86UD7 250 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 MRPL30Q8TCC3 161 aaKnown RBP14.02□□□□□ -0.17
USP42-207ENST00000521713 BLNKQ8WV28 456 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 RASL11BQ9BPW5 248 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 SCNM1Q9BWG6 230 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 LOC105371267A0A1B0GV96 52 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 VSIG10L2P0DP72 767 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 LGALS7P47929 136 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 SHISA5Q8N114 240 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 ABHD14BQ96IU4 210 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 SLC25A10Q9UBX3 287 aaPredicted RBP14.02□□□□□ -0.17
USP42-207ENST00000521713 IL19Q9UHD0 177 aa14.02□□□□□ -0.17
USP42-207ENST00000521713 MED19A0JLT2 244 aaPredicted RBP14.01□□□□□ -0.17
USP42-207ENST00000521713 PCP4P48539 62 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 ANKRD55Q3KP44 614 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 OR4F17Q8NGA8 305 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 OR4A4PQ8NGN8 299 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 VN1R17PQ8TDU5 208 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 ADAMTS17Q8TE56 1095 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 TIMP4Q99727 224 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 IGLV1-36A0A0B4J1U3 117 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 NPIPB9F8W1W9 429 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 MGST3O14880 152 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 ATP6V0CP27449 155 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 PRDX2P32119 198 aa14.01□□□□□ -0.17
USP42-207ENST00000521713 MRPL14Q6P1L8 145 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms