RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 FAM90A18PA6NE21 464 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 FAM90A16PA6NEW6 464 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 FAM90A9PA6NNJ1 464 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 FAM90A5PA8MXJ8 464 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ZNF878C9JN71 531 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 F5H5K5 113 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 CCSO14618 274 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 DFFBO76075 338 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OR2F2O95006 317 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SIX6O95475 246 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 GCGP01275 180 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 PRB2P02812 416 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 MELTFP08582 738 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SNRNP70P08621 437 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 FAM90A15PP0C7V4 464 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 FAM90A14PP0C7W9 464 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 RD3LP0DJH9 198 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 MPZP25189 248 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OR3A1P47881 315 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 UCP2P55851 309 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OR10A3P58181 314 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ACTBP60709 375 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 RPS23P62266 143 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SELENOTP62341 195 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ACTA2P62736 377 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 GRB2P62993 217 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ACTG2P63267 376 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ACTC1P68032 377 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ACTA1P68133 377 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 HGFACQ04756 655 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OR2F1Q13607 317 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 GAMTQ14353 236 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 RHEBQ15382 184 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 RAB11BQ15907 218 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 GUK1Q16774 197 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 KRTAP19-4Q3LI73 84 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 MOGAT2Q3SYC2 334 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SCGB2B2Q4G0G5 96 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OR52W1Q6IF63 320 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 COMMD2Q86X83 199 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 HIST2H2ABQ8IUE6 130 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SLC35F2Q8IXU6 374 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 BPIFB2Q8N4F0 458 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SAMD12Q8N8I0 201 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 PNLDC1Q8NA58 520 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 NUP37Q8NFH4 326 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OR10H4Q8NGA5 316 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OR13C8Q8NGS7 320 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 OTOSQ8NHW6 89 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ABHD4Q8TB40 342 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 DPF1Q92782 380 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 TAF15Q92804 592 aaKnown RBP eCLIP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SLAMF6Q96DU3 332 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 POM121L2Q96KW2 1035 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 C4orf45Q96LM5 186 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 CITED2Q99967 270 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ABHD6Q9BV23 337 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 PARD6GQ9BYG4 376 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ACTR3CQ9C0K3 210 aaPredicted RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 CSTL1Q9H114 145 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ELOVL3Q9HB03 270 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 PNRC2Q9NPJ4 139 aaKnown RBP5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 INPP5EQ9NRR6 644 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ABRACLQ9P1F3 81 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 SLC45A2Q9UMX9 530 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 ZFP30Q9Y2G7 519 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 KLHDC2Q9Y2U9 406 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 MMP24Q9Y5R2 645 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 TMEM14AQ9Y6G1 99 aa5.02□□□□□ -1.61
SMARCC1-204ENST00000462198 LOC105371242A0A075B767 164 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 A0A1B0GV72 72 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 TMEM269A0A1B0GVZ9 245 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 UBE2QL1A1L167 161 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 C20orf202A1L168 122 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 NKX6-3A6NJ46 265 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 ZNF785A8K8V0 405 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 M0QZ24 198 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 M0R135 149 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 SLC25A17O43808 307 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 CREBL2O60519 120 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 NCR1O76036 304 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 SPDEFO95238 335 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 NGFP01138 241 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 LCATP04180 440 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 NPSP0C0P6 89 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 H2BFMP0C1H6 154 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 OR4A8P0C604 315 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 NBEAP1P0C6P0 100 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 OR2T7P0C7T2 308 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 CELP19835 753 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 ALOX5APP20292 161 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 CD1BP29016 333 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 GLRXP35754 106 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 CDC34P49427 236 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 PPP1CBP62140 327 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 RANP62826 216 aaKnown RBP5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 KIAA0141Q14154 515 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 JOSD1Q15040 202 aaPredicted RBP5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 PSG3Q16557 428 aa5.01□□□□□ -1.61
SMARCC1-204ENST00000462198 ACTBL2Q562R1 376 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 662.4 ms