RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 JMJD8Q96S16 334 aa9.02□□□□□ -0.97
HMGCL-204ENST00000436439 PPA2Q9H2U2 334 aa9.02□□□□□ -0.97
HMGCL-204ENST00000436439 ZNF286AQ9HBT8 521 aa9.02□□□□□ -0.97
HMGCL-204ENST00000436439 ZNF230Q9UIE0 474 aaPredicted RBP9.02□□□□□ -0.97
HMGCL-204ENST00000436439 VSIG4Q9Y279 399 aa9.02□□□□□ -0.97
HMGCL-204ENST00000436439 MAB21L2Q9Y586 359 aa9.02□□□□□ -0.97
HMGCL-204ENST00000436439 DOCK11Q5JSL3 2073 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 KIR2DS1A0A191URI9 304 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 TMEM30CPA0ZSE6 113 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 NKX6-3A6NJ46 265 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 CEACAM18A8MTB9 384 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 G3V3Q6 166 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 GOSR2O14653 212 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 WIPF1O43516 503 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 FOXH1O75593 365 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 DIRAS3O95661 229 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 PMP2P02689 132 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 TK1P04183 234 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 S100A1P23297 94 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 KIR2DS4P43632 304 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 GABRA2P47869 451 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 IL13RA1P78552 427 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 KIR2DS1Q14954 304 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 GRK1Q15835 563 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 AWAT1Q58HT5 328 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 KLF17Q5JT82 389 aaPredicted RBP9.01□□□□□ -0.97
HMGCL-204ENST00000436439 OVCH2Q7RTZ1 564 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 LYG2Q86SG7 212 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 TERB2Q8NHR7 220 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 COQ2Q96H96 371 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 DUX5Q96PT3 197 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 CHIAQ9BZP6 476 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 PATZ1Q9HBE1 687 aaKnown RBP9.01□□□□□ -0.97
HMGCL-204ENST00000436439 CHMP1AQ9HD42 196 aaPredicted RBP9.01□□□□□ -0.97
HMGCL-204ENST00000436439 KIAA2026Q5HYC2 2103 aa9.01□□□□□ -0.97
HMGCL-204ENST00000436439 IGKV1D-8A0A087WSZ0 117 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 PPIAL4CA0A0B4J2A2 164 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 TRDCB7Z8K6 153 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 F5H0A9 414 aaPredicted RBP9□□□□□ -0.97
HMGCL-204ENST00000436439 SLC22A5O76082 557 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 GYPAP02724 150 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 ZBTB25P24278 435 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 CD34P28906 385 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 OR3A3P47888 321 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 TSPAN5P62079 268 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 SRSF4Q08170 494 aaKnown RBP9□□□□□ -0.97
HMGCL-204ENST00000436439 DHRS2Q13268 280 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 ATXN7L3Q14CW9 347 aaPredicted RBP9□□□□□ -0.97
HMGCL-204ENST00000436439 TMEM155Q4W5P6 130 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 TRAT1Q6PIZ9 186 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 BCL6BQ8N143 479 aaPredicted RBP9□□□□□ -0.97
HMGCL-204ENST00000436439 SIGLECL1Q8N7X8 197 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 ZNRF1Q8ND25 227 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 MRGPRFQ96AM1 343 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 ZNF48Q96MX3 618 aaPredicted RBP9□□□□□ -0.97
HMGCL-204ENST00000436439 NECAP2Q9NVZ3 263 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 POLR3KQ9Y2Y1 108 aaPredicted RBP9□□□□□ -0.97
HMGCL-204ENST00000436439 INSIG2Q9Y5U4 225 aa9□□□□□ -0.97
HMGCL-204ENST00000436439 HMSDA8MTL9 139 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 A8MXK9 166 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 ZNF205O95201 554 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 HLA-AP01891 365 aaKnown RBP8.99□□□□□ -0.97
HMGCL-204ENST00000436439 TFF1P04155 84 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 CTXN2P0C2S0 81 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 HLA-GP17693 338 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 FPR2P25090 351 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 ECI1P42126 302 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 ARPC4P59998 168 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 HLA-DRB3P79483 266 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 AESQ08117 197 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 SURF2Q15527 256 aaPredicted RBP8.99□□□□□ -0.97
HMGCL-204ENST00000436439 HMGN3Q15651 99 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 LGALSLQ3ZCW2 172 aaPredicted RBP8.99□□□□□ -0.97
HMGCL-204ENST00000436439 KRBOX4Q5JUW0 171 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 LIN54Q6MZP7 749 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 C11orf88Q6PI97 169 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 DHRS11Q6UWP2 260 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 LHFPL1Q86WI0 220 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 UXS1Q8NBZ7 420 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 TMEM185AQ8NFB2 350 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 OR4A4PQ8NGN8 299 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 MITD1Q8WV92 249 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 MAFIPQ8WZ33 124 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 CCL13Q99616 98 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 CABLES2Q9BTV7 478 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 NUP50Q9UKX7 468 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 TRAPPC2LQ9UL33 140 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 SOX21Q9Y651 276 aaPredicted RBP8.99□□□□□ -0.97
HMGCL-204ENST00000436439 AUP1Q9Y679 476 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 C9orf170A2RU37 121 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 DNAJC9-AS1A6NH13 148 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 NPIPB11E5RHQ5 1161 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 TMPRSS2O15393 492 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 DUS4LO95620 317 aaKnown RBP8.99□□□□□ -0.97
HMGCL-204ENST00000436439 HKR1P10072 659 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 RCC1P18754 421 aaPredicted RBP8.99□□□□□ -0.97
HMGCL-204ENST00000436439 GZMHP20718 246 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 GLIPR1P48060 266 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 P2RX3P56373 397 aa8.99□□□□□ -0.97
HMGCL-204ENST00000436439 H2BFSP57053 126 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms