RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 NFYBP25208 207 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 HTR1DP28221 377 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 CD34P28906 385 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 GABRA5P31644 462 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 SSTR5P35346 364 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 MAP2K4P45985 399 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 DYNLT3P51808 116 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 KRTAP10-3P60369 221 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 RPS25P62851 125 aaKnown RBP5.55□□□□□ -1.52
HMGN1-205ENST00000419378 MLLT11Q13015 90 aaPredicted RBP5.55□□□□□ -1.52
HMGN1-205ENST00000419378 GPR50Q13585 617 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 TPBGQ13641 420 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 TBCEQ15813 527 aaPredicted RBP5.55□□□□□ -1.52
HMGN1-205ENST00000419378 HLA-DRB5Q30154 266 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 HSD17B12Q53GQ0 312 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 SUMO4Q6EEV6 95 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 SLC35E4Q6ICL7 350 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 CEACAM19Q7Z692 300 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 LRRTM1Q86UE6 522 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF565Q8N9K5 539 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM104Q8NE00 496 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 OR4C13Q8NGP0 309 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF596Q8TC21 504 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 MRGPRDQ8TDS7 321 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 NEK7Q8TDX7 302 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM203Q969S6 136 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 FAM46BQ96A09 425 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 MRPS24Q96EL2 167 aaKnown RBP5.55□□□□□ -1.52
HMGN1-205ENST00000419378 CITED1Q99966 193 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 ABHD14AQ9BUJ0 271 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 SELENOIQ9C0D9 397 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 NPFFR1Q9GZQ6 430 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 BANF2Q9H503 90 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 RANBP3Q9H6Z4 567 aaPredicted RBP5.55□□□□□ -1.52
HMGN1-205ENST00000419378 LINC00574Q9H8X3 128 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 SPACA1Q9HBV2 294 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 RAB18Q9NP72 206 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 ISYNA1Q9NPH2 558 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 ABCB10Q9NRK6 738 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 IDI2-AS1Q9NZ38 188 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 DPM3Q9P2X0 92 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 BLOC1S6Q9UL45 172 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 HILPDAQ9Y5L2 63 aa5.55□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A10PA6NDY2 464 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A7PA6NKC0 464 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A22PA8MWA6 464 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A12PA8MX19 464 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A23PA8MXZ1 464 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 LEUTXA8MZ59 168 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 NPIPB11E5RHQ5 1161 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 AIPO00170 330 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 TOR1AO14656 332 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 SLC22A1O15245 554 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 CRTAPO75718 401 aaPredicted RBP5.54□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A13PP0C7W8 464 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 FAM90A24PP0C7X0 464 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 UBBP0CG47 229 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 SRMP19623 302 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 PSMA1P25786 263 aaKnown RBP5.54□□□□□ -1.52
HMGN1-205ENST00000419378 RBM39Q14498 530 aaKnown RBP5.54□□□□□ -1.52
HMGN1-205ENST00000419378 LTC4SQ16873 150 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 C1orf100Q5SVJ3 147 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 TPTE2P1Q5T6R2 138 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 GLT8D1Q68CQ7 371 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 RAB12Q6IQ22 244 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 CCBE1Q6UXH8 406 aaPredicted RBP5.54□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF497Q6ZNH5 498 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM91Q6ZNR0 172 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF367Q7RTV3 350 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 TMEM219Q86XT9 240 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 RFESDQ8TAC1 157 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 CCDC107Q8WV48 283 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 LEAP2Q969E1 77 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 CREB3L1Q96BA8 519 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 CYYR1Q96J86 154 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 MGLLQ99685 303 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 KRTAP9-3Q9BYQ3 159 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 CST11Q9H112 138 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 MMP28Q9H239 520 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 ZNF696Q9H7X3 374 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 ACOT13Q9NPJ3 140 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 GHRLQ9UBU3 117 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 PITPNC1Q9UKF7 332 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 SIGLEC9Q9Y336 463 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 MEGF8Q7Z7M0 2845 aa5.54□□□□□ -1.52
HMGN1-205ENST00000419378 NPIPB5A8MRT5 1133 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 MCRIP1C9JLW8 97 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 LY6LH3BQJ8 138 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 C15orf65H3BRN8 121 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 BUB1B-PAK6H3BSN5 160 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 RRHO14718 337 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 ARL6IP5O75915 188 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 IGLV2-14P01704 120 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 IGHV3-7P01780 117 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 MT-ND4P03905 459 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 CD37P11049 281 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 HTR2CP28335 458 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 CEACAM3P40198 252 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 KIR2DS4P43632 304 aa5.53□□□□□ -1.52
HMGN1-205ENST00000419378 GNG10P50151 68 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms