RNA–Protein interactions for RNA: ENST00000341423.9

HMGB1-203, Transcript of high mobility group box 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB1, Length 5,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1-203ENST00000341423 TAS2R3Q9NYW6 316 aa7.11□□□□□ -1.27
HMGB1-203ENST00000341423 LRP12Q9Y561 859 aa7.11□□□□□ -1.27
HMGB1-203ENST00000341423 KIF26BQ2KJY2 2108 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 NBR2O15453 112 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 DFFBO76075 338 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 PTGDSP41222 190 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 LPAR6P43657 344 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 OR10J3Q5JRS4 329 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 ASPHD2Q6ICH7 369 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 OR8B4Q96RC9 309 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 SLC25A15Q9Y619 301 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 LTBP1Q14766 1721 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 GPR31O00270 319 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 CAMLGP49069 296 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 MOGAT2Q3SYC2 334 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 C8orf86Q6ZUL3 223 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 ZDHHC22Q8N966 263 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 TMEM52Q8NDY8 209 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 ABHD1Q96SE0 405 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 TMEM133Q9H2Q1 129 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 ING1Q9UK53 422 aaPredicted RBP7.1□□□□□ -1.27
HMGB1-203ENST00000341423 LINC00312Q9Y6C7 94 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 COL5A3P25940 1745 aaPredicted RBP7.1□□□□□ -1.27
HMGB1-203ENST00000341423 DOCK6Q96HP0 2047 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 SCN3AQ9NY46 2000 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 CEACAM4O75871 244 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 HLA-DOBP13765 273 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 IL13RA2Q14627 380 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 WDR38Q5JTN6 314 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 CLEC19AQ6UXS0 136 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 RFPL4BQ6ZWI9 263 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 TMEM86BQ8N661 226 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 DRAM1Q8N682 238 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 TMEM18Q96B42 140 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 RCHY1Q96PM5 261 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 PKIBQ9C010 78 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 COQ10BQ9H8M1 238 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 IGHV1-46P01743 117 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 FCGR3AP08637 254 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 HTR1FP30939 366 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 DLX6P56179 175 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 ZNF585BQ52M93 769 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 OTPQ5XKR4 325 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 C22orf42Q6IC83 251 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 C7orf34Q96L11 122 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 PACRGQ96M98 296 aaPredicted RBP7.1□□□□□ -1.27
HMGB1-203ENST00000341423 TEAD3Q99594 435 aa7.1□□□□□ -1.27
HMGB1-203ENST00000341423 WDR61Q9GZS3 305 aaKnown RBP7.1□□□□□ -1.27
HMGB1-203ENST00000341423 IGHV3-35A0A0C4DH35 117 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 SERTM2A0A1B0GWG4 89 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 G3V2L1 256 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 J3KTA2 159 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 S100A8P05109 93 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 GPX1P07203 203 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 GPX2P18283 190 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 FCER1GP30273 86 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 HILS1P60008 231 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 PRADC1Q9BSG0 188 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 SBF1O95248 1867 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 LINC00271P0C7V0 271 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 MYCNOSP40205 109 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 OR5AP2Q8NGF4 316 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 CLCF1Q9UBD9 225 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 IGHV3-21A0A0B4J1V1 117 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 IQCF6A8MYZ5 107 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 K7EM74 188 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 PDGFAP04085 211 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 COL8A2P25067 703 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 ZDHHC24Q6UX98 284 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 FAM90A1Q86YD7 464 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 OR4C16Q8NGL9 310 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 GHSRQ92847 366 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 MARC2Q969Z3 335 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 TMEM101Q96IK0 257 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 OR51M1Q9H341 326 aa7.09□□□□□ -1.27
HMGB1-203ENST00000341423 DBX1A6NMT0 343 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 UBE2E1P51965 193 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 DEFB112Q30KQ8 113 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 FAM159AQ6UWV7 190 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 PIFOQ8TCI5 191 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 ZNF426Q9BUY5 554 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 FBXL15Q9H469 300 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 NRIP3Q9NQ35 241 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 TAS2R5Q9NYW4 299 aa7.09□□□□□ -1.28
HMGB1-203ENST00000341423 RPUSD1Q9UJJ7 312 aaKnown RBP7.09□□□□□ -1.28
HMGB1-203ENST00000341423 IGHV2-70DA0A0C4DH43 119 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 CLEC18AA5D8T8 446 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 CCL24O00175 119 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 SLC6A1P30531 599 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 NTF4P34130 210 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 FAM201AQ5SY85 155 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 RUSC1-AS1Q66K80 236 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 C15orf54Q8N8G6 183 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 OR4A4PQ8NGN8 299 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 USMG5Q96IX5 58 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 UGT2A1Q9Y4X1 527 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 CBY3A6NI87 242 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 GCM2O75603 506 aaPredicted RBP7.08□□□□□ -1.28
HMGB1-203ENST00000341423 ELANEP08246 267 aa7.08□□□□□ -1.28
HMGB1-203ENST00000341423 GPR183P32249 361 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms