RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 LAMTOR1Q6IAA8 161 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 FAM216BQ8N7L0 139 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 ZBTB34Q8NCN2 500 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 OR52L2PQ8NGH6 319 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 UBALD1Q8TB05 177 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 WDR89Q96FK6 387 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-233ENST00000557529 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 OR2S2Q9NQN1 319 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 PRR13Q9NZ81 148 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 JPT1Q9UK76 154 aa10.39□□□□□ -0.75
SHMT2-233ENST00000557529 CACNA1BQ00975 2339 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 TRGV10A0A0A0MS01 117 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 H0Y980 276 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 PGLYRP1O75594 196 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-233ENST00000557529 ADAP1O75689 374 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 GOSR1O95249 250 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 HOXB5P09067 269 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 OR8U9P0C7N5 309 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 SELLP14151 372 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 TMEM30BQ3MIR4 351 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 SP6Q3SY56 376 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 DTX2Q86UW9 622 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 OR8U1Q8NH10 309 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 GLYATL2Q8WU03 294 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 MSI2Q96DH6 328 aaKnown RBP10.38□□□□□ -0.75
SHMT2-233ENST00000557529 SEC22AQ96IW7 307 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 DCTN5Q9BTE1 182 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 TMEM222Q9H0R3 208 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 KCNS2Q9ULS6 477 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 UBE2J1Q9Y385 318 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-233ENST00000557529 BOLA1Q9Y3E2 137 aa10.38□□□□□ -0.75
SHMT2-233ENST00000557529 IGSF10Q6WRI0 2623 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 NBEAQ8NFP9 2946 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 DUXBA0A1W2PPF3 345 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 hADV38S2A0JD32 116 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 RNF212BA8MTL3 300 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 F2RL2O00254 374 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 TNFRSF13BO14836 293 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-233ENST00000557529 TMPRSS2O15393 492 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 CGB3P0DN86 165 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 CGB7P0DN87 165 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 SLC25A4P12235 298 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 MRPS11P82912 194 aaKnown RBP10.37□□□□□ -0.75
SHMT2-233ENST00000557529 C11orf71Q6IPW1 123 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 TMEM65Q6PI78 240 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 PPP1R1CQ8WVI7 109 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 NEU4Q8WWR8 484 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-233ENST00000557529 EDARADDQ8WWZ3 215 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 CORO2AQ92828 525 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 IL22RA2Q969J5 263 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 C18orf12Q96KH6 178 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 TP53RKQ96S44 253 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 TMEM246Q9BRR3 403 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 GON7Q9BXV9 100 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 SLA2Q9H6Q3 261 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 PLSCR3Q9NRY6 295 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 CALYQ9NYX4 217 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 KAAG1Q9UBP8 84 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 SLC25A10Q9UBX3 287 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-233ENST00000557529 LPAR3Q9UBY5 353 aa10.37□□□□□ -0.75
SHMT2-233ENST00000557529 FXYD6-FXYD2A0A087WZ82 144 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 TRAV14DV4A0A0A6YYC5 116 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 KBTBD11-OT1A0A1B0GTJ5 212 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 A0A1B0GW55 424 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 ZNF729A6NN14 1252 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-233ENST00000557529 ADAM20O43506 726 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 NDUFB3O43676 98 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 YPEL1O60688 119 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DANCRP0C864 163 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4L2P0CJ85 424 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4L3P0CJ86 424 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4L4P0CJ87 422 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4L5P0CJ88 424 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4L6P0CJ89 424 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4L7P0CJ90 424 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 NDUFB7P17568 137 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 F2RP25116 425 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 UCP1P25874 307 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 PSMB6P28072 239 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 PPP1CCP36873 323 aaKnown RBP10.36□□□□□ -0.75
SHMT2-233ENST00000557529 MEF2CQ06413 473 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-233ENST00000557529 LGALSLQ3ZCW2 172 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-233ENST00000557529 LRRC10Q5BKY1 277 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 GGNBP1Q5YKI7 109 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 C11orf87Q6NUJ2 197 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4L9Q6RFH8 374 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-233ENST00000557529 ZNF645Q8N7E2 425 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 RFESDQ8TAC1 157 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 THAP6Q8TBB0 222 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 TMEM56Q96MV1 263 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 BBC3Q96PG8 261 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-233ENST00000557529 YPEL2Q96QA6 119 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 PARP12Q9H0J9 701 aaKnown RBP10.36□□□□□ -0.75
SHMT2-233ENST00000557529 GNG12Q9UBI6 72 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 DUX4Q9UBX2 424 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 CLN8Q9UBY8 286 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 TMED3Q9Y3Q3 217 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 TMEM56-RWDD3S4R434 201 aa10.36□□□□□ -0.75
SHMT2-233ENST00000557529 PKDREJQ9NTG1 2253 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms