RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 RNASE3P12724 160 aaKnown RBP-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 CD82P27701 267 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 GABRR2P28476 465 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 RPS5P46782 204 aaKnown RBP-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 TSPEAR-AS2P59090 65 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 DYNC1I2Q13409 638 aaKnown RBP-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 IDNKQ5T6J7 187 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 OR10K2Q6IF99 312 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 FAM173BQ6P4H8 233 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 EIF3MQ7L2H7 374 aaKnown RBP-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 CENPQQ7L2Z9 268 aaPredicted RBP-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 LHFPL1Q86WI0 220 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 OR51T1Q8NGJ9 327 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 OR5J2Q8NH18 312 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 MBD3L1Q8WWY6 194 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 TAMM41Q96BW9 452 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 OR2AG1Q9H205 316 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 FBXL15Q9H469 300 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 ARMC7Q9H6L4 198 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 CFL2Q9Y281 166 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 FAM215AQ9Y5M1 114 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 ZDBF2Q9HCK1 2354 aa-0.57□□□□□ -2.5
RNU2-55P-201ENST00000411146 COL4A5P29400 1685 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 SIPA1L1O43166 1804 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 GRIFINA4D1Z8 144 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 TMEM235A6NFC5 223 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 OR5K4A6NMS3 321 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 C8orf87E5RJ46 101 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 C19orf84I3L1E1 186 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 K7EN84 100 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 FGF16O43320 207 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 CIB2O75838 187 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 PPP1CCP36873 323 aaKnown RBP-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 RPL27AP46776 148 aaKnown RBP-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 MP68P56378 58 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 SLC35B1P78383 322 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 ARHGAP11BQ3KRB8 267 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 CEP55Q53EZ4 464 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 PABPC1L2AQ5JQF8 200 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 C10orf55Q5SWW7 151 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 SSX9Q7RTT3 188 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 OR2W3Q7Z3T1 314 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 KTN1-AS1Q86SY8 53 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 C10orf107Q8IVU9 208 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 TEX9Q8N6V9 391 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 YIPF7Q8N8F6 280 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 OR9I1Q8NGQ6 314 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 TSKUQ8WUA8 353 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 CDCA4Q9BXL8 241 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 NXF2Q9GZY0 626 aaKnown RBP-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 NT5C3AQ9H0P0 336 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 C11orf49Q9H6J7 331 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 SETD5Q9C0A6 1442 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 CEP192Q8TEP8 1941 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 ANAPC1Q9H1A4 1944 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 CCDC88AQ3V6T2 1871 aa-0.58□□□□□ -2.5
RNU2-55P-201ENST00000411146 CASP8AP2Q9UKL3 1982 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 TRAV8-7A0A075B6U6 113 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 TRGV5A0A0B4J1U4 118 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 A0A0D9SG42 100 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 TRAPPC13A5PLN9 417 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 LRRIQ4A6NIV6 560 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 E7EWF7 191 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 HSBP1O75506 76 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 PMCHP20382 165 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 CRYBB3P26998 211 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 XCL1P47992 114 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 SLC35A2P78381 396 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 NDUFAF6Q330K2 333 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 KRTAP6-1Q3LI64 71 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 BEX5Q5H9J7 111 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 FAM43BQ6ZT52 329 aaPredicted RBP-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 TAS2R42Q7RTR8 314 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 SLC36A1Q7Z2H8 476 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 OFCC1Q8IZS5 231 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 C9orf163Q8N9P6 203 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 ZNF396Q96N95 335 aaPredicted RBP-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 MIEN1Q9BRT3 115 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 FAM192AQ9GZU8 254 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 MRPS30Q9NP92 439 aaKnown RBP-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 SNX12Q9UMY4 172 aa-0.59□□□□□ -2.5
RNU2-55P-201ENST00000411146 ASCC3Q8N3C0 2202 aaKnown RBP-0.6□□□□□ -2.5
RNU2-55P-201ENST00000411146 SMARCA4P51532 1647 aa-0.6□□□□□ -2.5
RNU2-55P-201ENST00000411146 MEIKINA0A087WXM9 373 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 TRBV6-7A0A0A0MS04 114 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 TVP23AA6NH52 213 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 FAM183AA6NL82 134 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 F8W036 122 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 H7C2Y5 167 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 WBP4O75554 376 aaKnown RBP-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 GCLMP48507 274 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 CLDN18P56856 261 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 DYNLL1P63167 89 aaKnown RBP-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 LCN2P80188 198 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 HSP90B2PQ58FF3 399 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 TMEM31Q5JXX7 168 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 SPANXN2Q5MJ10 180 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 FAM19A1Q7Z5A9 133 aa-0.6□□□□□ -2.51
RNU2-55P-201ENST00000411146 ZNF565Q8N9K5 539 aa-0.6□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms