RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 ZNF497Q6ZNH5 498 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 GPR87Q9BY21 358 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 LIN7CQ9NUP9 197 aaKnown RBP19.12■□□□□ 0.65
HOXD1-201ENST00000331462 MMP24Q9Y5R2 645 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 C9orf172C9J069 976 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 FBP1P09467 338 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 ZNF883P0CG24 379 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 S100PP25815 95 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 Q8IYB0 196 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 TMEM105Q8N8V8 129 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 OR1K1Q8NGR3 316 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 RPRMQ9NS64 109 aa19.12■□□□□ 0.65
HOXD1-201ENST00000331462 RHBDL1O75783 438 aa19.11■□□□□ 0.65
HOXD1-201ENST00000331462 IL18BPO95998 194 aa19.11■□□□□ 0.65
HOXD1-201ENST00000331462 BCL2P10415 239 aa19.11■□□□□ 0.65
HOXD1-201ENST00000331462 SERF2P84101 59 aa19.11■□□□□ 0.65
HOXD1-201ENST00000331462 PNRC1Q12796 327 aaPredicted RBP19.11■□□□□ 0.65
HOXD1-201ENST00000331462 FAM90A2PQ658T7 463 aa19.11■□□□□ 0.65
HOXD1-201ENST00000331462 SLC25A24Q6NUK1 477 aa19.11■□□□□ 0.65
HOXD1-201ENST00000331462 RNASE11Q8TAA1 199 aaKnown RBP19.11■□□□□ 0.65
HOXD1-201ENST00000331462 SCGB1C1Q8TD33 95 aa19.11■□□□□ 0.65
HOXD1-201ENST00000331462 ARGFXA6NJG6 315 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 C21orf140B9A014 251 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 CEBPGP53567 150 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 ERVFRD-1P60508 538 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 ERVK11-1P61568 191 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 ZNF585BQ52M93 769 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 OR13D1Q8NGV5 346 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 NANOS1Q8WY41 292 aaKnown RBP19.1■□□□□ 0.65
HOXD1-201ENST00000331462 BCL2L2Q92843 193 aaPredicted RBP19.1■□□□□ 0.65
HOXD1-201ENST00000331462 MBNL3Q9NUK0 354 aaKnown RBP19.1■□□□□ 0.65
HOXD1-201ENST00000331462 TMEM242Q9NWH2 141 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 CXCL1P09341 107 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 CA6P23280 308 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 CDX1P47902 265 aaPredicted RBP19.1■□□□□ 0.65
HOXD1-201ENST00000331462 HBG1P69891 147 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 HBG2P69892 147 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 LRRC75BQ2VPJ9 315 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 OR2T2Q6IF00 324 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 HAPLN4Q86UW8 402 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 MCEMP1Q8IX19 187 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 IL1F10Q8WWZ1 152 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 RTL8AQ9BWD3 113 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 PSENENQ9NZ42 101 aa19.1■□□□□ 0.65
HOXD1-201ENST00000331462 FAM90A26D6RGX4 464 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 JMJD7P0C870 316 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 ARL16Q0P5N6 197 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 PMS2P11Q13670 270 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 IZUMO4Q1ZYL8 232 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 DCAF10Q5QP82 559 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 ZNF787Q6DD87 383 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 ZNF343Q6P1L6 599 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 ZNF610Q8N9Z0 462 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 P2RX4Q99571 388 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 RSG1Q9BU20 258 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 GNG13Q9P2W3 67 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 PRSS50Q9UI38 385 aa19.09■□□□□ 0.65
HOXD1-201ENST00000331462 ZNF726P1Q15940 193 aa19.08■□□□□ 0.65
HOXD1-201ENST00000331462 NCMAPQ5T1S8 102 aa19.08■□□□□ 0.65
HOXD1-201ENST00000331462 TMEM9BQ9NQ34 198 aa19.08■□□□□ 0.65
HOXD1-201ENST00000331462 MIOXQ9UGB7 285 aa19.08■□□□□ 0.65
HOXD1-201ENST00000331462 POLDIP2Q9Y2S7 368 aa19.08■□□□□ 0.65
HOXD1-201ENST00000331462 WIPI2Q9Y4P8 454 aa19.08■□□□□ 0.65
HOXD1-201ENST00000331462 A0A1W2PR80 420 aa19.08■□□□□ 0.64
HOXD1-201ENST00000331462 OR2H2O95918 312 aa19.08■□□□□ 0.64
HOXD1-201ENST00000331462 MT-CO3P00414 261 aa19.08■□□□□ 0.64
HOXD1-201ENST00000331462 RND2P52198 227 aa19.08■□□□□ 0.64
HOXD1-201ENST00000331462 PLGLB1Q02325 96 aa19.08■□□□□ 0.64
HOXD1-201ENST00000331462 WDR86Q86TI4 376 aa19.08■□□□□ 0.64
HOXD1-201ENST00000331462 TOLLIPQ9H0E2 274 aa19.08■□□□□ 0.64
HOXD1-201ENST00000331462 P4HA3Q7Z4N8 544 aa19.07■□□□□ 0.64
HOXD1-201ENST00000331462 MDP1Q86V88 176 aa19.07■□□□□ 0.64
HOXD1-201ENST00000331462 PINX1Q96BK5 328 aaKnown RBP19.07■□□□□ 0.64
HOXD1-201ENST00000331462 RCC1LQ96I51 464 aaKnown RBP19.07■□□□□ 0.64
HOXD1-201ENST00000331462 FOXJ2Q9P0K8 574 aa19.07■□□□□ 0.64
HOXD1-201ENST00000331462 OR14J1Q9UGF5 321 aa19.07■□□□□ 0.64
HOXD1-201ENST00000331462 IGHV2-70P01814 119 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 METTL15P1P0C7V9 234 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 IAPPP10997 89 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 ZNF146Q15072 292 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 FBXW9Q5XUX1 488 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 C1orf210Q8IVY1 113 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 CA5BP1Q8WTZ4 195 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 ZNF665Q9H7R5 613 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 PPP1R3CQ9UQK1 317 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 KLF13Q9Y2Y9 288 aaPredicted RBP19.06■□□□□ 0.64
HOXD1-201ENST00000331462 ARHGAP21Q5T5U3 1957 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 IFITM10A6NMD0 228 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 ZNF674Q2M3X9 581 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 TMEM41BQ5BJD5 291 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 WDR61Q9GZS3 305 aaKnown RBP19.06■□□□□ 0.64
HOXD1-201ENST00000331462 SMOC1Q9H4F8 434 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 PLA2G3Q9NZ20 509 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 DOK5Q9P104 306 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 TRAPPC2LQ9UL33 140 aa19.06■□□□□ 0.64
HOXD1-201ENST00000331462 ZNF407Q9C0G0 2248 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 TGIF2-C20orf24A0A0A6YYL0 155 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 RNF212BA8MTL3 300 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 PGA5P0DJD9 388 aa19.05■□□□□ 0.64
HOXD1-201ENST00000331462 RAB11AP62491 216 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms