RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RAB33BQ9H082 229 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 SIGLEC7Q9Y286 467 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 A0A1W2PR80 420 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 C7orf77A4D0Y5 90 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 CA11O75493 328 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 KLKB1P03952 638 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 POLR2GP62487 172 aaKnown RBP eCLIP7.69□□□□□ -1.18
NIPBL-201ENST00000282516 BEX4Q9NWD9 120 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-201ENST00000282516 OPN4Q9UHM6 478 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 SYNGR1O43759 233 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 CHST1O43916 411 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 SMIM13P0DJ93 91 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 MMP9P14780 707 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 GABRG2P18507 467 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 CCL7P80098 99 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 MMDQ15546 238 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 C2orf88Q9BSF0 95 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 CLN8Q9UBY8 286 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 TMIGD3P0DMS9 266 aaPredicted RBP7.69□□□□□ -1.18
NIPBL-201ENST00000282516 ZNF880Q6PDB4 577 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 MARVELD1Q9BSK0 173 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 PAGE4O60829 102 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 GHRHP01286 108 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 FOLR2P14207 255 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 TMEM179BQ7Z7N9 219 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 GAPTQ8N292 157 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 OR10AG1Q8NH19 301 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 K7N7A8 449 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 ZFP64Q9NPA5 681 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 INSIG2Q9Y5U4 225 aa7.69□□□□□ -1.18
NIPBL-201ENST00000282516 LOXL3P58215 753 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 PWWP2BQ6NUJ5 590 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 MZB1Q8WU39 189 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 ISOC2Q96AB3 205 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 SPAG8Q99932 426 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 OR5AC2Q9NZP5 309 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 HSF4Q9ULV5 492 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 F11RQ9Y624 299 aaKnown RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 IGKV3-7A0A075B6H7 116 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 TMEM210A6NLX4 147 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 HLA-DRB1P01911 266 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 ANKRD33Q7Z3H0 272 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 OR6X1Q8NH79 312 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 SFRP2Q96HF1 295 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 PRDM14Q9GZV8 571 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 LRRK1Q38SD2 2015 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 TRAV8-7A0A075B6U6 113 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 KLK8O60259 260 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 PSG9Q00887 426 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 MEF2CQ06413 473 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 CYB561D1Q8N8Q1 229 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 ADAMTS5Q9UNA0 930 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 OR2A4O95047 310 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 SUMO2P61956 95 aaKnown RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 TCF24Q7RTU0 167 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 MDP1Q86V88 176 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 OR2A7Q96R45 310 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 SLIRPQ9GZT3 109 aaKnown RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 CDKN2AP42771 156 aaKnown RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 RNFT1Q5M7Z0 435 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 LDLRAD1Q5T700 205 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 CRYGNQ8WXF5 182 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 ASB10Q8WXI3 467 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 C17orf51A8MQB3 221 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 LEUTXA8MZ59 168 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 WIPI1Q5MNZ9 446 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 MOGAT3Q86VF5 341 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 PATE1Q8WXA2 126 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 MRGPRFQ96AM1 343 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 ABHD14BQ96IU4 210 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 H3BRM9 83 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 FGF5P12034 268 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 FOXB2Q5VYV0 432 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 OTPQ5XKR4 325 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 TMEM45BQ96B21 275 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 PSMG3Q9BT73 122 aaPredicted RBP7.68□□□□□ -1.18
NIPBL-201ENST00000282516 GPR35Q9HC97 309 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 DAOP14920 347 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 SELENOPP49908 381 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 SELENOTP62341 195 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 SERF2P84101 59 aa7.68□□□□□ -1.18
NIPBL-201ENST00000282516 PLPP3O14495 311 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 GZMHP20718 246 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 FOXC1Q12948 553 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 ZCCHC14Q8WYQ9 949 aaKnown RBP7.67□□□□□ -1.18
NIPBL-201ENST00000282516 PRDX2P32119 198 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 TMEM50BP56557 158 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 TMEM177Q53S58 311 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 WFDC3Q8IUB2 231 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 WNT5BQ9H1J7 359 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 HEATR5AQ86XA9 2040 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 RIF1Q5UIP0 2472 aaKnown RBP7.67□□□□□ -1.18
NIPBL-201ENST00000282516 CXorf65A6NEN9 183 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 IGHV3-13P01766 116 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 IGHV3-7P01780 117 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 IGHV4-34P06331 123 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 RPS4XP62701 263 aaKnown RBP7.67□□□□□ -1.18
NIPBL-201ENST00000282516 TMEM101Q96IK0 257 aa7.67□□□□□ -1.18
NIPBL-201ENST00000282516 PEF1Q9UBV8 284 aaKnown RBP7.67□□□□□ -1.18
NIPBL-201ENST00000282516 DSPPQ9NZW4 1301 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms