RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 SOCS1O15524 211 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 TCF21O43680 179 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 LHX8Q68G74 356 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 TCRBV16S1A1N1A0A5B0 115 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 DIRC3C9JPN6 131 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 KLF9Q13886 244 aaPredicted RBP15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 MAFAQ8NHW3 353 aaPredicted RBP15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 Q8WTZ3 238 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 INSIG2Q9Y5U4 225 aa15.34■□□□□ 0.05
NOTCH3-201ENST00000263388 CD1BP29016 333 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 CTGFP29279 349 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 RASL10BQ96S79 203 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 IFITM10A6NMD0 228 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 RPS4XP62701 263 aaKnown RBP15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 MESTQ5EB52 335 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 SLC16A13Q7RTY0 426 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 OR8I2Q8N0Y5 310 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 ASCL3Q9NQ33 180 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 CDC42EP3Q9UKI2 254 aa15.33■□□□□ 0.05
NOTCH3-201ENST00000263388 GAGE10A6NGK3 116 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 UBE2L6O14933 153 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 NMUP48645 174 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 WNT16Q9UBV4 365 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 H3BQ15 152 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 MUC15Q8N387 334 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 ZNF383Q8NA42 475 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 PKDREJQ9NTG1 2253 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 Q6ZS52 159 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 ISOC2Q96AB3 205 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 FUT9Q9Y231 359 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 CD3EP07766 207 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 PAFAH1B2P68402 229 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 ZIC1Q15915 447 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 LINC00862A6NCI5 91 aa15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 ITGBL1O95965 494 aaPredicted RBP15.33■□□□□ 0.04
NOTCH3-201ENST00000263388 C21orf140B9A014 251 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 F2RL2O00254 374 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 OR4A8P0C604 315 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 CIRBPQ14011 172 aaKnown RBP15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 SLC25A40Q8TBP6 338 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 FLYWCH2Q96CP2 140 aaKnown RBP15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 NTMQ9P121 344 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 CTXND1A0A1B0GTU2 59 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 H1FOOQ8IZA3 346 aaPredicted RBP15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 OR2Y1Q8NGV0 311 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 HARBI1Q96MB7 349 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 MGPP08493 103 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 MPLP40238 635 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 TWIST1Q15672 202 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 CLPPQ16740 277 aaPredicted RBP15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 SSMEM1Q8WWF3 244 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 DYSFO75923 2080 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 FBLL1A6NHQ2 334 aaKnown RBP15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 FAM157CP0CG43 387 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 C1orf210Q8IVY1 113 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 ADAD2Q8NCV1 583 aaKnown RBP15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 PPP1CCP36873 323 aaKnown RBP15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 LIMS2Q7Z4I7 341 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 LRRC3BQ96PB8 259 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 DRD3P35462 400 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 SERF2P84101 59 aa15.32■□□□□ 0.04
NOTCH3-201ENST00000263388 IGHV3-13P01766 116 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 IGHV3-7P01780 117 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 UBE2V2Q15819 145 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 OR1L8Q8NGR8 309 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 TMEM140Q9NV12 185 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 FAM90A27PA6NNH2 459 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 TMEM255AQ5JRV8 349 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 VN1R4Q7Z5H5 301 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 GBGT1Q8N5D6 347 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 FAM131CQ96AQ9 280 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 ID1P41134 155 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 LHX9Q9NQ69 397 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 HYAL1Q12794 435 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 MRAP2Q96G30 205 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 TMUB1Q9BVT8 246 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 TMEM50BP56557 158 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 HYAL3O43820 417 aaPredicted RBP15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 JOSD1Q15040 202 aaPredicted RBP15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 BHLHA9Q7RTU4 235 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 ALG14Q96F25 216 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 IGHV1OR15-9A0A0B4J2B8 117 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 SYNGR1O43759 233 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 SEC11BP0C7V7 166 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 TCFL5Q9UL49 500 aa15.31■□□□□ 0.04
NOTCH3-201ENST00000263388 LOC107984156A0A0G2JMH3 177 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 ARL17AQ8IVW1 177 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 ABHD14AQ9BUJ0 271 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 LRRC37AA6NMS7 1700 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 C7orf77A4D0Y5 90 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 OR4C45A6NMZ5 311 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 TNFSF14O43557 240 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 HOXB3P14651 431 aaPredicted RBP15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 EWSR1Q01844 656 aaKnown RBP eCLIP15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 OR4X1Q8NH49 305 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 PIGYQ3MUY2 71 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 SNURFLB1AK76 121 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 TSPAN13O95857 204 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 NCMAPQ5T1S8 102 aa15.3■□□□□ 0.04
NOTCH3-201ENST00000263388 IL19Q9UHD0 177 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms