RNA–Protein interactions for RNA: ENST00000578789.1

MKS1-207, Transcript of Meckel syndrome, type 1, humanhuman

TSL 4

Gene MKS1, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-207ENST00000578789 C12orf77C9JDV5 145 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 J3QR06 171 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 RRP9O43818 475 aaKnown RBP11.64□□□□□ -0.55
MKS1-207ENST00000578789 CHST1O43916 411 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 RAB3BP20337 219 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 CEACAM3P40198 252 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 CLDN12P56749 244 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 OR10A3P58181 314 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 LOXL3P58215 753 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 LTC4SQ16873 150 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 Q3ZCU0 254 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 TPTE2P1Q5T6R2 138 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 HES5Q5TA89 166 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 SHISA2Q6UWI4 295 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 ZNF554Q86TJ5 538 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 C8orf31Q8N9H6 132 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 OR51D1Q8NGF3 324 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 LINC01006Q8NI28 216 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 WFDC12Q8WWY7 111 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 LEAP2Q969E1 77 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 FAM3DQ96BQ1 224 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 RANBP3Q9H6Z4 567 aaPredicted RBP11.64□□□□□ -0.55
MKS1-207ENST00000578789 GFOD1Q9NXC2 390 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 PITPNC1Q9UKF7 332 aa11.64□□□□□ -0.55
MKS1-207ENST00000578789 AMMECR1Q9Y4X0 333 aaPredicted RBP11.64□□□□□ -0.55
MKS1-207ENST00000578789 TMEM272A0A1B0GTI8 110 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 IFITM5A6NNB3 132 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 TNFAIP8O95379 198 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 JUNBP17275 347 aaPredicted RBP11.63□□□□□ -0.55
MKS1-207ENST00000578789 BLVRBP30043 206 aaPredicted RBP11.63□□□□□ -0.55
MKS1-207ENST00000578789 RAB13P51153 203 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 NEDD8Q15843 81 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 C2orf76Q3KRA6 126 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 CCBE1Q6UXH8 406 aaPredicted RBP11.63□□□□□ -0.55
MKS1-207ENST00000578789 C6orf201Q7Z4U5 140 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 NR2C2APQ86WQ0 139 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 LINC00311Q8N616 119 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 SSR3Q9UNL2 185 aa11.63□□□□□ -0.55
MKS1-207ENST00000578789 SDCBPO00560 298 aaPredicted RBP11.62□□□□□ -0.55
MKS1-207ENST00000578789 SOCS1O15524 211 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 SPINT2O43291 252 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 NAPSAO96009 420 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 IGHV3-7P01780 117 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 HBZP02008 142 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 RCC1P18754 421 aaPredicted RBP11.62□□□□□ -0.55
MKS1-207ENST00000578789 GNG10P50151 68 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 ARHGDIBP52566 201 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 PROK1P58294 105 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 CCDC144NLQ6NUI1 221 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 UBALD1Q8TB05 177 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 FAAP24Q9BTP7 215 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 NPFFR1Q9GZQ6 430 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 OR51E2Q9H255 320 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 ZNF696Q9H7X3 374 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 HSF4Q9ULV5 492 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 RNF114Q9Y508 228 aa11.62□□□□□ -0.55
MKS1-207ENST00000578789 A0A087WXM4 84 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 TRBV6-6A0A0A6YYG2 114 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 BRS3P32247 399 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 PLA2G7Q13093 441 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 MADCAM1Q13477 382 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 HMGN3Q15651 99 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 ZNF880Q6PDB4 577 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 Q6ZPA2 131 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 MOB1BQ7L9L4 216 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 TPRA1Q86W33 373 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 ZNF439Q8NDP4 499 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 TSPAN14Q8NG11 270 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 OR56B1Q8NGI3 324 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 OR4C13Q8NGP0 309 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 OR1L1Q8NH94 360 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 TOMM40LQ969M1 308 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 RPEQ96AT9 228 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 TAF9BQ9HBM6 251 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 PLEKHJ1Q9NW61 149 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 KCNIP1Q9NZI2 227 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 RAB22AQ9UL26 194 aa11.61□□□□□ -0.55
MKS1-207ENST00000578789 IGHV3-43A0A0B4J1X8 118 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 A0A1W2PPI3 338 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 TRIM64CA6NLI5 447 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 NOTOA8MTQ0 251 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 IGHV3-43DP0DP04 118 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 CD36P16671 472 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 RAB6AP20340 208 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 GADD45AP24522 165 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 MNDAP41218 407 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 KIR2DS4P43632 304 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 RAB7AP51149 207 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 TMEM50BP56557 158 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 FAM53AQ6NSI3 398 aaPredicted RBP11.6□□□□□ -0.55
MKS1-207ENST00000578789 C16orf82Q7Z2V1 217 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 TMEM219Q86XT9 240 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 OR10X1Q8NGY0 326 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 PTX4Q96A99 478 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 KCTD7Q96MP8 289 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 OCSTAMPQ9BR26 566 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 CHCHD6Q9BRQ6 235 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 RIMS4Q9H426 269 aaPredicted RBP11.6□□□□□ -0.55
MKS1-207ENST00000578789 LIN7BQ9HAP6 207 aa11.6□□□□□ -0.55
MKS1-207ENST00000578789 GNG12Q9UBI6 72 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms