RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 IGHV1-18A0A0C4DH31 117 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 A0A1B0GW55 424 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 IQCF6A8MYZ5 107 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 E5RGE8 158 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 DUX4L2P0CJ85 424 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 DUX4L3P0CJ86 424 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 DUX4L4P0CJ87 422 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 DUX4L5P0CJ88 424 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 DUX4L6P0CJ89 424 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 DUX4L7P0CJ90 424 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 CEACAM1P13688 526 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 COX5AP20674 150 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 ERVK11-1P61568 191 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 Q6ZS49 121 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 CMTM1Q8IZ96 169 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 EIF4E3Q8N5X7 224 aaKnown RBP8.97□□□□□ -0.97
CUX1-217ENST00000558836 AIFM2Q9BRQ8 373 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 ZNF71Q9NQZ8 489 aaPredicted RBP8.97□□□□□ -0.97
CUX1-217ENST00000558836 DUX4Q9UBX2 424 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 LPAR3Q9UBY5 353 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 METRNQ9UJH8 293 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 PURGQ9UJV8 347 aaKnown RBP8.97□□□□□ -0.97
CUX1-217ENST00000558836 KCNS2Q9ULS6 477 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 NSG2Q9Y328 171 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 OR2W1Q9Y3N9 320 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 A0A0G2JRQ6 117 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 PSG2P11465 335 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 TAGLNQ01995 201 aaKnown RBP8.97□□□□□ -0.97
CUX1-217ENST00000558836 IL13RA2Q14627 380 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 MSMPQ1L6U9 139 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 C11orf53Q8IXP5 236 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 TMEM217Q8N7C4 229 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 PLPPR2Q96GM1 343 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 PLSCR4Q9NRQ2 329 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 POLDIP2Q9Y2S7 368 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 TMED3Q9Y3Q3 217 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 ATRXP46100 2492 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 H3BP45 60 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 CDS2O95674 445 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 HAND1O96004 215 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 ADCYAP1P18509 176 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 CEACAM6P40199 344 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 OR8G5Q8NG78 346 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 OR4D5Q8NGN0 318 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 DNTTIP1Q9H147 329 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 PIGMQ9H3S5 423 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 TREM1Q9NP99 234 aa8.97□□□□□ -0.97
CUX1-217ENST00000558836 TPRP12270 2363 aaKnown RBP8.96□□□□□ -0.97
CUX1-217ENST00000558836 AHRRA9YTQ3 701 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 SH2D1BO14796 132 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 CEACAM4O75871 244 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 CST7O76096 145 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 CNOT4O95628 575 aaKnown RBP8.96□□□□□ -0.97
CUX1-217ENST00000558836 NKX2-1P43699 371 aaPredicted RBP8.96□□□□□ -0.97
CUX1-217ENST00000558836 TESK1Q15569 626 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 ANKRD39Q53RE8 183 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 SPRNQ5BIV9 151 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 C22orf34Q6ZV56 151 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 BHLHA15Q7RTS1 189 aaPredicted RBP8.96□□□□□ -0.97
CUX1-217ENST00000558836 SH3BGRL2Q9UJC5 107 aa8.96□□□□□ -0.97
CUX1-217ENST00000558836 PTPRQQ9UMZ3 2332 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 IGHV2OR16-5A0A0B4J2B6 119 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 PTBP3O95758 552 aaKnown RBP8.96□□□□□ -0.98
CUX1-217ENST00000558836 TMEM50AO95807 157 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 CGAP01215 116 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 IGLV2-14P01704 120 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 GNMTQ14749 295 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 GUCA2BQ16661 112 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 OR2B11Q5JQS5 317 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 ZNF474Q6S9Z5 364 aaPredicted RBP8.96□□□□□ -0.98
CUX1-217ENST00000558836 ZNF497Q6ZNH5 498 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 LINC00596Q86U02 117 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 H1FOOQ8IZA3 346 aaPredicted RBP8.96□□□□□ -0.98
CUX1-217ENST00000558836 OR2Z1Q8NG97 314 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 OR1L1Q8NH94 360 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 RFESDQ8TAC1 157 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 S100PBPQ96BU1 408 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 TMEM56Q96MV1 263 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 RIMS4Q9H426 269 aaPredicted RBP8.96□□□□□ -0.98
CUX1-217ENST00000558836 FAM215AQ9Y5M1 114 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 TMEM56-RWDD3S4R434 201 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 LRBAP50851 2863 aa8.96□□□□□ -0.98
CUX1-217ENST00000558836 TACC2O95359 2948 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 PRSS44E7EML9 344 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 M0R1B8 84 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 TAAR5O14804 337 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 JTBO76095 146 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 CTXN2P0C2S0 81 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 F2RP25116 425 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 GCH1P30793 250 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 LTC4SQ16873 150 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 Q6ZRG5 221 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 Q6ZRM9 215 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 CCDC36Q8IYA8 594 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 RBMXL3Q8N7X1 1067 aaKnown RBP8.95□□□□□ -0.98
CUX1-217ENST00000558836 ARL11Q969Q4 196 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 DCTN5Q9BTE1 182 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 BCL2L14Q9BZR8 327 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 PLEKHA2Q9HB19 425 aa8.95□□□□□ -0.98
CUX1-217ENST00000558836 TMEM218A2RU14 115 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms