RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 FAHD2BQ6P2I3 314 aaPredicted RBP25.26■■□□□ 1.63
CCM2-219ENST00000544363 ZFAND1Q8TCF1 268 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 IGFBPL1Q8WX77 278 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 TOMM40LQ969M1 308 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 ARL11Q969Q4 196 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 FAHD2AQ96GK7 314 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 CHODLQ9H9P2 273 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 OR1A1Q9P1Q5 309 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 FAM172BPA6NC97 362 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 NDUFB3O43676 98 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 CREBL2O60519 120 aaPredicted RBP25.26■■□□□ 1.63
CCM2-219ENST00000544363 NDUFB7P17568 137 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 EFNA4P52798 201 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 ZNF626Q68DY1 528 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 FGFRL1Q8N441 504 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 OR52B4Q8NGK2 314 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 CTSZQ9UBR2 303 aa25.26■■□□□ 1.63
CCM2-219ENST00000544363 C14orf166Q9Y224 244 aaKnown RBP25.26■■□□□ 1.63
CCM2-219ENST00000544363 C15orf65H3BRN8 121 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 HEXAP06865 529 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 CTSDP07339 412 aaPredicted RBP25.25■■□□□ 1.63
CCM2-219ENST00000544363 PI3P19957 117 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 IL2RGP31785 369 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 SSTR5P35346 364 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 LRRC10Q5BKY1 277 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 MUC20Q8N307 709 aaPredicted RBP25.25■■□□□ 1.63
CCM2-219ENST00000544363 RAB1CQ92928 201 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 TIMD4Q96H15 378 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 MED28Q9H204 178 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 ZNF69Q9UC07 566 aa25.25■■□□□ 1.63
CCM2-219ENST00000544363 MEX3AA1L020 520 aaKnown RBP25.24■■□□□ 1.63
CCM2-219ENST00000544363 SPINT2O43291 252 aa25.24■■□□□ 1.63
CCM2-219ENST00000544363 HSPA12AO43301 675 aa25.24■■□□□ 1.63
CCM2-219ENST00000544363 NDUFS7O75251 213 aa25.24■■□□□ 1.63
CCM2-219ENST00000544363 AKR1C4P17516 323 aa25.24■■□□□ 1.63
CCM2-219ENST00000544363 FCN3O75636 299 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 TMEM33P57088 247 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 UBE2MP61081 183 aaKnown RBP25.23■■□□□ 1.63
CCM2-219ENST00000544363 AVPI1Q5T686 147 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 TMEM230Q96A57 120 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 OR2W1Q9Y3N9 320 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 PPIHO43447 177 aaKnown RBP25.23■■□□□ 1.63
CCM2-219ENST00000544363 SSNA1O43805 119 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 ZBTB25P24278 435 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 DHODHQ02127 395 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 TMEM128Q5BJH2 165 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 CD276Q5ZPR3 534 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 AKAP14Q86UN6 197 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 SLC38A6Q8IZM9 456 aa25.23■■□□□ 1.63
CCM2-219ENST00000544363 ZNF431Q8TF32 576 aaPredicted RBP25.23■■□□□ 1.63
CCM2-219ENST00000544363 TRGV10A0A0A0MS01 117 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 DVL1O14640 695 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 CGB3P0DN86 165 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 CGB7P0DN87 165 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 DHRS2Q13268 280 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 PPP1R1AQ13522 171 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 RFESDQ8TAC1 157 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 CCL19Q99731 98 aa25.22■■□□□ 1.63
CCM2-219ENST00000544363 CEACAM6P40199 344 aa25.21■■□□□ 1.63
CCM2-219ENST00000544363 LYG2Q86SG7 212 aa25.21■■□□□ 1.63
CCM2-219ENST00000544363 CORO2AQ92828 525 aa25.21■■□□□ 1.63
CCM2-219ENST00000544363 RSRP1Q9BUV0 290 aa25.21■■□□□ 1.63
CCM2-219ENST00000544363 RDH8Q9NYR8 311 aa25.21■■□□□ 1.63
CCM2-219ENST00000544363 USF3Q68DE3 2245 aa25.21■■□□□ 1.63
CCM2-219ENST00000544363 IGKV1D-13A0A0B4J2D9 117 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 HLA-AP01891 365 aaKnown RBP25.2■■□□□ 1.62
CCM2-219ENST00000544363 IGKV1-13P0DP09 117 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 HTD2P86397 168 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 MEF2CQ06413 473 aaPredicted RBP25.2■■□□□ 1.62
CCM2-219ENST00000544363 FCN2Q15485 313 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 TMEM155Q4W5P6 130 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 LPCAT3Q6P1A2 487 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 TCF23Q7RTU1 214 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 TOLLIPQ9H0E2 274 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 CALYQ9NYX4 217 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 DSCAML1Q8TD84 2053 aa25.2■■□□□ 1.62
CCM2-219ENST00000544363 hADV38S2A0JD32 116 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 C9orf170A2RU37 121 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 CCNKO75909 580 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 OR52L2PQ8NGH6 319 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 SECTM1Q8WVN6 248 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 RAB9BQ9NP90 201 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 LRRK2Q5S007 2527 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 C17orf58Q2M2W7 97 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 ABCA11PQ4W5N1 156 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 ZNF295-AS1Q8N0V1 137 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 ZNF486Q96H40 463 aaPredicted RBP25.19■■□□□ 1.62
CCM2-219ENST00000544363 SLC5A7Q9GZV3 580 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 LINC00312Q9Y6C7 94 aa25.19■■□□□ 1.62
CCM2-219ENST00000544363 VAMP1P23763 118 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 GNRHRP30968 328 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 RPL31P62899 125 aaKnown RBP25.18■■□□□ 1.62
CCM2-219ENST00000544363 CD300CQ08708 224 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 OR10V1Q8NGI7 309 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 NINJ1Q92982 152 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 PPP1R14BQ96C90 147 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 OR2S2Q9NQN1 319 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 MIOXQ9UGB7 285 aa25.18■■□□□ 1.62
CCM2-219ENST00000544363 UBE2J1Q9Y385 318 aaPredicted RBP25.18■■□□□ 1.62
CCM2-219ENST00000544363 DCHS2Q6V1P9 2916 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms