RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	LMO4	P61968	165 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	CARTPT	Q16568	116 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	DEFB113	Q30KQ7	82 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	CCBE1	Q6UXH8	406 aa	Predicted RBP	10.03	□□□□□ -0.8
MATR3-231	ENST00000502394		Q6ZNX1	250 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	OR8B3	Q8NGG8	313 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	GIMAP1	Q8WWP7	306 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	FAM168A	Q92567	244 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	NINJ1	Q92982	152 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	PERP	Q96FX8	193 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	OR8B2	Q96RD0	313 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	DPAGT1	Q9H3H5	408 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	CELSR2	Q9HCU4	2923 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	LPAR3	Q9UBY5	353 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	PCDHB10	Q9UN67	800 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	LINC00312	Q9Y6C7	94 aa		10.03	□□□□□ -0.8
MATR3-231	ENST00000502394	TRBV23-1	A0A0A0MS06	115 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	FAM240B	A0A1B0GVZ2	78 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	10.02	□□□□□ -0.81
MATR3-231	ENST00000502394		A8MXK9	166 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	F2RL2	O00254	374 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	TCRB	P04435	133 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	HEXA	P06865	529 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	SSTR5	P35346	364 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	DLX6	P56179	175 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	DSCR9	P59020	149 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	RPL31	P62899	125 aa	Known RBP	10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	ZNF273	Q14593	569 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	TRIM16L	Q309B1	348 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	C11orf91	Q3C1V1	193 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	KIAA2026	Q5HYC2	2103 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	AADACL3	Q5VUY0	350 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	CLEC2A	Q6UVW9	174 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	BTN2A1	Q7KYR7	527 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	NLRC3	Q7RTR2	1065 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	LY6G5B	Q8NDX9	201 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	OR1L1	Q8NH94	360 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	CLDND2	Q8NHS1	167 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	ENKUR	Q8TC29	256 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	UPRT	Q96BW1	309 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	KIRREL1	Q96J84	757 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	PRRT1	Q99946	306 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	PIMREG	Q9BSJ6	248 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	MARVELD1	Q9BSK0	173 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	MCUB	Q9NWR8	336 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	TAS2R3	Q9NYW6	316 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	CALY	Q9NYX4	217 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	KCNIP1	Q9NZI2	227 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	COPZ2	Q9P299	210 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	SCP2D1	Q9UJQ7	156 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	UBE2J1	Q9Y385	318 aa	Predicted RBP	10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	ABCA12	Q86UK0	2595 aa		10.02	□□□□□ -0.81
MATR3-231	ENST00000502394	IGHV4-30-2	A0A087WSY4	118 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394		A0A096LNT2	108 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	TRGV10	A0A0A0MS01	117 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	KBTBD11-OT1	A0A1B0GTJ5	212 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	hADV38S2	A0JD32	116 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	ZNF729	A6NN14	1252 aa	Predicted RBP	10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	C22orf46	C9J442	243 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	IFNA6	P05013	189 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	DNASE1	P24855	282 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	MECP2	P51608	486 aa	Known RBP	10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	HTD2	P86397	168 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	RBMS2	Q15434	407 aa	Known RBP	10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	TMEM200B	Q69YZ2	307 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	IDO2	Q6ZQW0	420 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	ZNF565	Q8N9K5	539 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	TERB2	Q8NHR7	220 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	UBALD1	Q8TB05	177 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	ARL11	Q969Q4	196 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	DACT3	Q96B18	629 aa	Predicted RBP	10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	SLC25A21	Q9BQT8	299 aa	Predicted RBP	10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	FXYD6	Q9H0Q3	95 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	MMP28	Q9H239	520 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	OR1A1	Q9P1Q5	309 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	CLN8	Q9UBY8	286 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	NUBP2	Q9Y5Y2	271 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	POLQ	O75417	2590 aa		10.01	□□□□□ -0.81
MATR3-231	ENST00000502394	NAV2	Q8IVL1	2488 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	APC	P25054	2843 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	MEX3A	A1L020	520 aa	Known RBP	10	□□□□□ -0.81
MATR3-231	ENST00000502394	OR5H14	A6NHG9	310 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	BET1	O15155	118 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	SPINT2	O43291	252 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	RAG2	P55895	527 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	LOXL3	P58215	753 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	PAX2	Q02962	417 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	TMEM30B	Q3MIR4	351 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	TMEM17	Q86X19	198 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	LDLRAD3	Q86YD5	345 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	KRTAP1-3	Q8IUG1	177 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	C11orf42	Q8N5U0	333 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	OR6F1	Q8NGZ6	308 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	CREB3L1	Q96BA8	519 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	MOB3A	Q96BX8	217 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	GALM	Q96C23	342 aa		10	□□□□□ -0.81
MATR3-231	ENST00000502394	ZNF2	Q9BSG1	426 aa	Predicted RBP	10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 33 ms