RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 OR9I1Q8NGQ6 314 aa1.23□□□□□ -2.21
VPS50-219ENST00000495039 GALMQ96C23 342 aa1.23□□□□□ -2.21
VPS50-219ENST00000495039 SIKE1Q9BRV8 207 aa1.23□□□□□ -2.21
VPS50-219ENST00000495039 MAT2BQ9NZL9 334 aa1.23□□□□□ -2.21
VPS50-219ENST00000495039 STK38LQ9Y2H1 464 aa1.23□□□□□ -2.21
VPS50-219ENST00000495039 ATAD5Q96QE3 1844 aa1.23□□□□□ -2.21
VPS50-219ENST00000495039 RAB3GAP2Q9H2M9 1393 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 ZNF638Q14966 1978 aaKnown RBP1.22□□□□□ -2.21
VPS50-219ENST00000495039 OTOFQ9HC10 1997 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 KNCNA6PVL3 124 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 ODF3BA8MYP8 253 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 F8VP50 259 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 POLR3GO15318 223 aaPredicted RBP1.22□□□□□ -2.21
VPS50-219ENST00000495039 TRAPPC3O43617 180 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 S1PR2O95136 353 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 RAB36O95755 333 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 APOA1P02647 267 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 IVLP07476 585 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 FBP1P09467 338 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 RCVRNP35243 200 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 ACTR1BP42025 376 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 GABARAPL2P60520 117 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 C1QTNF8P60827 252 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 SKP2Q13309 424 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 FLOT2Q14254 428 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 PSG3Q16557 428 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 HES3Q5TGS1 186 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 SDIM1Q6ZPB5 146 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 ZBTB8OSQ8IWT0 167 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 MUC15Q8N387 334 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 OR5D18Q8NGL1 313 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 CCDC124Q96CT7 223 aaKnown RBP1.22□□□□□ -2.21
VPS50-219ENST00000495039 DNAJC30Q96LL9 226 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 EBNA1BP2Q99848 306 aaKnown RBP1.22□□□□□ -2.21
VPS50-219ENST00000495039 TTTY12Q9BZ98 90 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 XKR8Q9H6D3 395 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 DMAC2Q9NW81 257 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 SNX24Q9Y343 169 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 CRB1P82279 1406 aa1.22□□□□□ -2.21
VPS50-219ENST00000495039 SORL1Q92673 2214 aa1.21□□□□□ -2.21
VPS50-219ENST00000495039 SLIT2O94813 1529 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 COL4A2P08572 1712 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 ICE1Q9Y2F5 2266 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 A0A0J9YX75 114 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 EFCAB9A8MZ26 197 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 ZNF189O75820 626 aaPredicted RBP1.21□□□□□ -2.22
VPS50-219ENST00000495039 NQO1P15559 274 aaKnown RBP1.21□□□□□ -2.22
VPS50-219ENST00000495039 SPAM1P38567 509 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 AKR1C2P52895 323 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 DYNLL1P63167 89 aaKnown RBP1.21□□□□□ -2.22
VPS50-219ENST00000495039 BSPH1Q075Z2 132 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 STX3Q13277 289 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 HTR4Q13639 388 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 MAPK14Q16539 360 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 OR10J3Q5JRS4 329 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 Q6ZS52 159 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 CCDC121Q6ZUS5 278 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 TCAIMQ8N3R3 496 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 ZFAND2AQ8N6M9 145 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 OR11L1Q8NGX0 322 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 ERMNQ8TAM6 284 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 NAP1L5Q96NT1 182 aaPredicted RBP1.21□□□□□ -2.22
VPS50-219ENST00000495039 SLC19A3Q9BZV2 496 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 OR51E2Q9H255 320 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 C11orf49Q9H6J7 331 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 MRM2Q9UI43 246 aaKnown RBP1.21□□□□□ -2.22
VPS50-219ENST00000495039 PSORS1C2Q9UIG4 136 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 HEY1Q9Y5J3 304 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 OR51B4Q9Y5P0 310 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 MTCH2Q9Y6C9 303 aa1.21□□□□□ -2.22
VPS50-219ENST00000495039 PTPRJQ12913 1337 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 LOC100506127A0A0U1RQW1 187 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 A0A1B0GX12 115 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 A0A1W2PQL4 384 aaPredicted RBP1.2□□□□□ -2.22
VPS50-219ENST00000495039 FNDC10F2Z333 226 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 J3QLI3 93 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 CYTH3O43739 400 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 CDK14O94921 469 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 EPPINO95925 133 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 NQO2P16083 231 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 ZNF7P17097 686 aaPredicted RBP1.2□□□□□ -2.22
VPS50-219ENST00000495039 LCN1P31025 176 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 GABRA4P48169 554 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 RWDD2BP57060 319 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 DEFA6Q01524 100 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 ZNF117Q03924 483 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 PDK2Q15119 407 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 Q3ZCU0 254 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 FBXO48Q5FWF7 155 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 EBLN2Q6P2I7 272 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 C2orf73Q8N5S3 287 aaPredicted RBP1.2□□□□□ -2.22
VPS50-219ENST00000495039 ZNF251Q9BRH9 671 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 CXCL16Q9H2A7 254 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 COMMD9Q9P000 198 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 FBXL3Q9UKT7 428 aa1.2□□□□□ -2.22
VPS50-219ENST00000495039 H3BRN7 92 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 GPR171O14626 319 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 SGCEO43556 437 aa1.19□□□□□ -2.22
VPS50-219ENST00000495039 FADS2O95864 444 aaKnown RBP1.19□□□□□ -2.22
VPS50-219ENST00000495039 TPM1P09493 284 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms