RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 C20orf144Q9BQM9 153 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 OR6C3Q9NZP0 311 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 RNF115Q9Y4L5 304 aa13.12□□□□□ -0.31
CLSTN1-205ENST00000477264 IGHV5-10-1A0A0J9YXX1 117 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 LNP1A1A4G5 178 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 MAP1LC3B2A6NCE7 125 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 H3BMH7 237 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 CHST1O43916 411 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 TMEM50AO95807 157 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 SCGB1D1O95968 90 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF41P51814 821 aaPredicted RBP13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 MRPS34P82930 218 aaKnown RBP13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 MALLQ13021 153 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 MFAP5Q13361 173 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 NKAIN1Q4KMZ8 207 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF774Q6NX45 483 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 OR2T10Q8NGZ9 312 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF501Q96CX3 271 aaPredicted RBP13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 MAP1LC3BQ9GZQ8 125 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 ADAMTS20P59510 1910 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 LOC102725191A0A1B0GVB3 256 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 H3BML4 177 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 ATXN8OSP0DMR3 200 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 ERVS71-1P61550 626 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 RPL23P62829 140 aaKnown RBP13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 PLA2G2CQ5R387 149 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 LCN15Q6UWW0 184 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 FOXL2NBQ6ZUU3 175 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 OSR2Q8N2R0 312 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 OR10J5Q8NHC4 309 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 FUT9Q9Y231 359 aa13.11□□□□□ -0.31
CLSTN1-205ENST00000477264 H0Y980 276 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 VENTXO95231 258 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 GZMHP20718 246 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 GNRHRP30968 328 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 PAX9P55771 341 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 MEF2BQ02080 365 aaPredicted RBP13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF726P1Q15940 193 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 SPTSSAQ969W0 71 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 CCDC74BQ96LY2 380 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 C5orf63A6NC05 138 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 UBE2NP61088 152 aaKnown RBP13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 NSDHLQ15738 373 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 CARD17Q5XLA6 110 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 OR6C1Q96RD1 312 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 PCGF1Q9BSM1 259 aa13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 REPIN1Q9BWE0 567 aaKnown RBP13.1□□□□□ -0.31
CLSTN1-205ENST00000477264 M0R135 149 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF737O75373 536 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF205O95201 554 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 CNOT4O95628 575 aaKnown RBP13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 HLA-HP01893 362 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 CD55P08174 381 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF92Q03936 586 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 DMRTC1Q5HYR2 192 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 C10orf128Q5T292 105 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 RNF138Q8WVD3 245 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 BORCS8Q96FH0 119 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 ZNF799Q96GE5 643 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 OPN3Q9H1Y3 402 aaPredicted RBP13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 RBKSQ9H477 322 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 PLK3Q9H4B4 646 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 MANBALQ9NQG1 85 aa13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 NCOA6Q14686 2063 aaPredicted RBP13.09□□□□□ -0.31
CLSTN1-205ENST00000477264 A0A1B0GX78 115 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 A0A1W2PPQ1 181 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 F5H5K5 113 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 ANGPTL7O43827 346 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 TCN2P20062 427 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 FBLP22087 321 aaKnown RBP13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 S100GP29377 79 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 EFNA3P52797 238 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 ELLP55199 621 aaPredicted RBP13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 HBG1P69891 147 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 HBG2P69892 147 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 MRPS11P82912 194 aaKnown RBP13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 PLPPR5Q32ZL2 321 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 MIEN1Q9BRT3 115 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 RARRES3Q9UL19 164 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 TIMM9Q9Y5J7 89 aa13.08□□□□□ -0.31
CLSTN1-205ENST00000477264 FAM90A10PA6NDY2 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A18PA6NE21 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A16PA6NEW6 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A20PA6NIJ5 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A8PA6NJQ4 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A7PA6NKC0 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A22PA8MWA6 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A12PA8MX19 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A5PA8MXJ8 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A23PA8MXZ1 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 PRR33A8MZF0 331 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 SPRY1O43609 319 aaPredicted RBP13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 TNFSF13O75888 250 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 OR2J2O76002 312 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 MMP7P09237 267 aaPredicted RBP13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A15PP0C7V4 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A13PP0C7W8 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A14PP0C7W9 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 FAM90A24PP0C7X0 464 aa13.08□□□□□ -0.32
CLSTN1-205ENST00000477264 CD99P14209 185 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms