RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 TIMP4Q99727 224 aa7.87□□□□□ -1.15
HPS4-208ENST00000464362 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.87□□□□□ -1.15
HPS4-208ENST00000464362 CLN8Q9UBY8 286 aa7.87□□□□□ -1.15
HPS4-208ENST00000464362 SSUH2Q9Y2M2 353 aa7.87□□□□□ -1.15
HPS4-208ENST00000464362 A0A1W2PR77 199 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 XKRY2A2RUG3 117 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 DEDDO75618 318 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 CST2P09228 141 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 SEC11BP0C7V7 166 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 GALR1P47211 349 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 HES1Q14469 280 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 SMIM21Q3B7S5 101 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 ZNF766Q5HY98 468 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 FDX2Q6P4F2 183 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 IL22RA2Q969J5 263 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 BTF3L4Q96K17 158 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 TAAR9Q96RI9 348 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 COMMD5Q9GZQ3 224 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 DOK5Q9P104 306 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 A8MXK9 166 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 LTBRP36941 435 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 PMELP40967 661 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 RPL29P47914 159 aaKnown RBP7.86□□□□□ -1.15
HPS4-208ENST00000464362 CEBPDP49716 269 aaPredicted RBP7.86□□□□□ -1.15
HPS4-208ENST00000464362 TCL1AP56279 114 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 ERVFC1-1P60608 527 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 BSXQ3C1V8 233 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 ZNF826PQ6ZT77 177 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 LRRC29Q8WV35 223 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 DECR2Q9NUI1 292 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 PROCRQ9UNN8 238 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 TRAV34A0A0B4J273 112 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 H0YIZ8 118 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 IL24Q13007 206 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 WDR25Q64LD2 544 aaPredicted RBP7.86□□□□□ -1.15
HPS4-208ENST00000464362 CYB5R2Q6BCY4 276 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 ZNF343Q6P1L6 599 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 DBX2Q6ZNG2 339 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 EDARADDQ8WWZ3 215 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 BORCS7Q96B45 105 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 SARAFQ96BY9 339 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 CIB3Q96Q77 187 aaPredicted RBP7.86□□□□□ -1.15
HPS4-208ENST00000464362 SRXN1Q9BYN0 137 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 CLCF1Q9UBD9 225 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 MKI67P46013 3256 aaKnown RBP7.86□□□□□ -1.15
HPS4-208ENST00000464362 A0A0U1RQV5 110 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 ZIC3O60481 467 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 PAGE4O60829 102 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 CDS2O95674 445 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 TRGC2P03986 189 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 RFPL3SP0C7P2 107 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 PMCHP20382 165 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 SSPNQ14714 243 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 TOMM20LQ6UXN7 152 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 ATP5SQ99766 215 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 ZNF331Q9NQX6 463 aaPredicted RBP7.86□□□□□ -1.15
HPS4-208ENST00000464362 NPTNQ9Y639 398 aa7.86□□□□□ -1.15
HPS4-208ENST00000464362 A0A1B0GTI1 187 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 TOX3O15405 576 aaPredicted RBP7.85□□□□□ -1.15
HPS4-208ENST00000464362 CD8AP01732 235 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 SOX8P57073 446 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 ZNF124Q15973 351 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 PHYHD1Q5SRE7 291 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 GLRX5Q86SX6 157 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 SLC2A8Q9NY64 477 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 OR2W1Q9Y3N9 320 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 IGKV3D-11A0A0A0MRZ8 115 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 HSBP1L1C9JCN9 74 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 ST8SIA5O15466 376 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 MT-CO3P00414 261 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 CDC34P49427 236 aaPredicted RBP7.85□□□□□ -1.15
HPS4-208ENST00000464362 PLAURQ03405 335 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 TMEM211Q6ICI0 200 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 BTNL8Q6UX41 500 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 ADAMTS17Q8TE56 1095 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 ABHD14BQ96IU4 210 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 TECTBQ96PL2 329 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 AQP10Q96PS8 301 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 SF3B5Q9BWJ5 86 aaKnown RBP7.85□□□□□ -1.15
HPS4-208ENST00000464362 ZNF355PQ9NSJ1 428 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 TRAPPC1Q9Y5R8 145 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 HELZP42694 1942 aaKnown RBP7.85□□□□□ -1.15
HPS4-208ENST00000464362 A0A087X0M5 115 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 A0A1B0GX30 115 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
HPS4-208ENST00000464362 CNIH1O95406 144 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 DEFA4P12838 97 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 PRF1P14222 555 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 HIST1H3AP68431 136 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 PAQR4Q8N4S7 273 aaPredicted RBP7.85□□□□□ -1.15
HPS4-208ENST00000464362 OR10X1Q8NGY0 326 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 TP53RKQ96S44 253 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 FUT9Q9Y231 359 aa7.85□□□□□ -1.15
HPS4-208ENST00000464362 OR5B21A6NL26 309 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 KIAA1324LA8MWY0 1029 aaPredicted RBP7.84□□□□□ -1.15
HPS4-208ENST00000464362 SPEM2Q0P670 501 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 ARSJQ5FYB0 599 aaPredicted RBP7.84□□□□□ -1.15
HPS4-208ENST00000464362 MDP1Q86V88 176 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 ZADH2Q8N4Q0 377 aa7.84□□□□□ -1.15
HPS4-208ENST00000464362 ZNF383Q8NA42 475 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms