RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CASP6P55212 293 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 TAS2R45P59539 299 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 UNC119Q13432 240 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 OR8B8Q15620 311 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 IZUMO4Q1ZYL8 232 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 KDF1Q8NAX2 398 aaPredicted RBP10.05□□□□□ -0.8
VPS33A-201ENST00000267199 STARD4Q96DR4 205 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 GFI1Q99684 422 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 OR2D2Q9H210 308 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 J3QRE1 110 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 M0R1X1 148 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 FCGR3BO75015 233 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 FCER1GP30273 86 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 FDX2Q6P4F2 183 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 LINC00114Q6XXX2 140 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 SLC35E1Q96K37 410 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 S1PR3Q99500 378 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 DDA1Q9BW61 102 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 LOC102723971A0A1B0GUV8 181 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 TOX4O94842 621 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 CYB5R3P00387 301 aaPredicted RBP10.05□□□□□ -0.8
VPS33A-201ENST00000267199 PSG2P11465 335 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 PRF1P14222 555 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 OR10J1P30954 320 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 TCTEX1D1Q8N7M0 179 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 OR5AU1Q8NGC0 362 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 SGMS2Q8NHU3 365 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 ACY3Q96HD9 319 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 SMOC1Q9H4F8 434 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 PSG11Q9UQ72 335 aa10.05□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF729A6NN14 1252 aaPredicted RBP10.04□□□□□ -0.8
VPS33A-201ENST00000267199 CELA2AP08217 269 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 OR1C1Q15619 314 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 MRPL54Q6P161 138 aaKnown RBP10.04□□□□□ -0.8
VPS33A-201ENST00000267199 BTNL3Q6UXE8 466 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 OR4A4PQ8NGN8 299 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 NOL4LQ96MY1 436 aaPredicted RBP10.04□□□□□ -0.8
VPS33A-201ENST00000267199 LRFN3Q9BTN0 628 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 TMEM147Q9BVK8 224 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 G6PC2Q9NQR9 355 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 LYRM2Q9NU23 88 aaPredicted RBP10.04□□□□□ -0.8
VPS33A-201ENST00000267199 ZDHHC8Q9ULC8 765 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 LHFPL6Q9Y693 200 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 H0YIZ8 118 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 IER3P46695 156 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 OR3A1P47881 315 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 CNN1P51911 297 aaKnown RBP10.04□□□□□ -0.8
VPS33A-201ENST00000267199 TRA2AQ13595 282 aaKnown RBP eCLIP10.04□□□□□ -0.8
VPS33A-201ENST00000267199 SLC25A45Q8N413 288 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 OR1P1Q8NH06 330 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 SSMEM1Q8WWF3 244 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 SLC22A20A6NK97 555 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 PITX3O75364 302 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 SLC35B1P78383 322 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 REC114Q7Z4M0 266 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 UBALD2Q8IYN6 164 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 H1FXQ92522 213 aaKnown RBP10.04□□□□□ -0.8
VPS33A-201ENST00000267199 A0A0J9YW62 118 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 SLC31A2O15432 143 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 NDUFB7P17568 137 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 BCL3P20749 454 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 GNG4P50150 75 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 PAX5Q02548 391 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 TEX30Q5JUR7 227 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 OR5D13Q8NGL4 314 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 FLVCR1-AS1Q8TAF5 88 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 ABHD3Q8WU67 409 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 ARRDC1-AS1Q9H2J1 176 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 BET1LQ9NYM9 111 aa10.04□□□□□ -0.8
VPS33A-201ENST00000267199 RAMP1O60894 148 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 HSPB1P04792 205 aaKnown RBP10.03□□□□□ -0.8
VPS33A-201ENST00000267199 SPINK14Q6IE38 97 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 SLC35E3Q7Z769 313 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 SMDT1Q9H4I9 107 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 FAM206AQ9NX38 181 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 A0A1B0GTQ1 180 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 SNURFLB1AK76 121 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 PCP4P48539 62 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 CD81P60033 236 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 BIVMQ86UB2 503 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 H1FOOQ8IZA3 346 aaPredicted RBP10.03□□□□□ -0.8
VPS33A-201ENST00000267199 TRIB1Q96RU8 372 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 HIF1ANQ9NWT6 349 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 RNF24Q9Y225 148 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 CRYM-AS1A6NIL9 109 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 NDUFS6O75380 124 aaKnown RBP10.03□□□□□ -0.8
VPS33A-201ENST00000267199 TNFSF15O95150 251 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 LIFP15018 202 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 ANAPC16Q96DE5 110 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 TAAR6Q96RI8 345 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 HSPB9Q9BQS6 159 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 RNF126Q9BV68 326 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 SRD5A3Q9H8P0 318 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 TAAR3PQ9P1P4 343 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 ZNF835Q9Y2P0 537 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 DOCK8Q8NF50 2099 aa10.03□□□□□ -0.8
VPS33A-201ENST00000267199 RRP8O43159 456 aaKnown RBP10.02□□□□□ -0.8
VPS33A-201ENST00000267199 CT45A6P0DMU7 189 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 CT45A5P0DMU8 189 aa10.02□□□□□ -0.8
VPS33A-201ENST00000267199 CT45A7P0DMV0 189 aa10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms