RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 IGKV1D-17A0A075B6S4 117 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 IGHV3OR15-7A0A075B7D8 119 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 TMEM30CPA0ZSE6 113 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 FUOMA2VDF0 154 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 NDUFA2O43678 99 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 NAPSAO96009 420 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 MT-ND4P03905 459 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 CSN2P05814 226 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 SLC6A1P30531 599 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 KIR2DS4P43632 304 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 RFX2P48378 723 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 CEBPDP49716 269 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-208ENST00000553868 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-208ENST00000553868 KIR2DS1Q14954 304 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 SFRP4Q6FHJ7 346 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-208ENST00000553868 SLC35E4Q6ICL7 350 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 ZNF782Q6ZMW2 699 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-208ENST00000553868 Q6ZS49 121 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 NRARPQ7Z6K4 114 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 TMEM17Q86X19 198 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 CD177Q8N6Q3 437 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 DUSP18Q8NEJ0 188 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 OR5T2Q8NGG2 359 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 OR5D13Q8NGL4 314 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 OR4C16Q8NGL9 310 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 SDSLQ96GA7 329 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 TIMD4Q96H15 378 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 MED30Q96HR3 178 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 HDHD3Q9BSH5 251 aaPredicted RBP12.03□□□□□ -0.48
SHMT2-208ENST00000553868 FAM234AQ9H0X4 552 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 SCP2D1Q9UJQ7 156 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 ZNF222Q9UK12 451 aa12.03□□□□□ -0.48
SHMT2-208ENST00000553868 MGST3O14880 152 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 AMY2AP04746 511 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 FCER2P06734 321 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 PAX5Q02548 391 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 GRK1Q15835 563 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 CR1LQ2VPA4 569 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 VAX1Q5SQQ9 334 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 ATPAF1Q5TC12 328 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-208ENST00000553868 OR52W1Q6IF63 320 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 CCBE1Q6UXH8 406 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF497Q6ZNH5 498 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 SLC36A1Q7Z2H8 476 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 ARRDC1Q8N5I2 433 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 DEFB108BQ8NET1 73 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 OR4S1Q8NGB4 309 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 OR5AP2Q8NGF4 316 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 DYRK2Q92630 601 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 SNAPC3Q92966 411 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 PRRT1Q99946 306 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 Q9N2K0 584 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF230Q9UIE0 474 aaPredicted RBP12.02□□□□□ -0.49
SHMT2-208ENST00000553868 ANXA10Q9UJ72 324 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 TRAPPC2LQ9UL33 140 aa12.02□□□□□ -0.49
SHMT2-208ENST00000553868 TMEM82A0PJX8 343 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 VGLL3A8MV65 326 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 M0QYG6 137 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 SIGLEC5O15389 551 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 PSPNO60542 156 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF737O75373 536 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 GYPAP02724 150 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 CTXN2P0C2S0 81 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 DAOP14920 347 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 GIFP27352 417 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 HRH1P35367 487 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 OR3A1P47881 315 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 GZMKP49863 264 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 EFNA4P52798 201 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 BTG1P62324 171 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 IL13RA1P78552 427 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 ATXN7L3Q14CW9 347 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-208ENST00000553868 CDK10Q15131 360 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 FAM201AQ5SY85 155 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 TRAT1Q6PIZ9 186 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 ZNF788Q6ZQV5 615 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 C17orf107Q6ZR85 190 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 GAPTQ8N292 157 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 MUC20Q8N307 709 aaPredicted RBP12.01□□□□□ -0.49
SHMT2-208ENST00000553868 MRPL30Q8TCC3 161 aaKnown RBP12.01□□□□□ -0.49
SHMT2-208ENST00000553868 RAB1CQ92928 201 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 OCEL1Q9H607 264 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 NECAP2Q9NVZ3 263 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 SLC2A8Q9NY64 477 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 KCNIP1Q9NZI2 227 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 NUBP2Q9Y5Y2 271 aa12.01□□□□□ -0.49
SHMT2-208ENST00000553868 TRDCB7Z8K6 153 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 K7N7A8 449 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 TMPRSS2O15393 492 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 RP2O75695 350 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 PMP2P02689 132 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 TK1P04183 234 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 SLC25A16P16260 332 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 USF1P22415 310 aaPredicted RBP12□□□□□ -0.49
SHMT2-208ENST00000553868 BTCP35070 178 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 GLP1RP43220 463 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 TSPAN5P62079 268 aa12□□□□□ -0.49
SHMT2-208ENST00000553868 HOXA4Q00056 320 aaPredicted RBP12□□□□□ -0.49
SHMT2-208ENST00000553868 PLA1AQ53H76 456 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms