RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 WNT16Q9UBV4 365 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 CXorf65A6NEN9 183 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 COLCA2A8K830 154 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 DEFB108AA8MXU0 73 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 NGFP01138 241 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 ZNF17P17021 662 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 FAM27BQ5VT28 67 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 MRGPRGQ86SM5 289 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 SIGLECL1Q8N7X8 197 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 HLA-CQ95604 372 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 MOB3AQ96BX8 217 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 MSI2Q96DH6 328 aaKnown RBP8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 TP53RKQ96S44 253 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 MSL2Q9HCI7 577 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 ZNF319Q9P2F9 582 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 CEP350Q5VT06 3117 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 NOTCH4Q99466 2003 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 A0A0A6YYD4 124 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 TCAPO15273 167 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 CST2P09228 141 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 HIST1H3AP68431 136 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 RNF144BQ7Z419 303 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 MYPOPQ86VE0 399 aaPredicted RBP8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 NEIL1Q96FI4 390 aaPredicted RBP8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 PARD6AQ9NPB6 346 aa8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.87□□□□□ -0.99
SMARCC2-209ENST00000550164 DIDO1Q9BTC0 2240 aaKnown RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 LOC390937A0A1W2PQ73 354 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 RPL36A-HNRNPH2H7BZ11 118 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 CER1O95813 267 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 HSPB1P04792 205 aaKnown RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 IRF2P14316 349 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 FABP6P51161 128 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 SSTP61278 116 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 FOXO1Q12778 655 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 HLA-BQ31612 363 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 LINC00469Q8N7U9 141 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 Q9N2K0 584 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 ZNF586Q9NXT0 402 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 DMRT1Q9Y5R6 373 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 NCOR1O75376 2440 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 HSBP1L1C9JCN9 74 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 OR7C2O60412 319 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 NPIPB7O75200 414 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 TRGC1P0CF51 173 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 PSG4Q00888 419 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 OR8B8Q15620 311 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 ZNF385CQ66K41 422 aaPredicted RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 H1FOOQ8IZA3 346 aaPredicted RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 SPEM1Q8N4L4 309 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 POC1BQ8TC44 478 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 MRPL30Q8TCC3 161 aaKnown RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 OR2D2Q9H210 308 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 CNOT1A5YKK6 2376 aaKnown RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 IGKV1-9A0A0C4DH69 117 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 PAGE4O60829 102 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 SRD5A2P31213 254 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 CDC34P49427 236 aaPredicted RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 SUPT4H1P63272 117 aaKnown RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 ASPHD2Q6ICH7 369 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 WDR74Q6RFH5 385 aaPredicted RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 MESP1Q9BRJ9 268 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 KCNIP2Q9NS61 270 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 TAAR3PQ9P1P4 343 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 OR2W1Q9Y3N9 320 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 DNAH12Q6ZR08 3092 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 ROS1P08922 2347 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 IGKV1D-8A0A087WSZ0 117 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 IGKV3D-11A0A0A0MRZ8 115 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 IGHV3-43A0A0B4J1X8 118 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 LDLRAD4O15165 306 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 IGHV3-43DP0DP04 118 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 LIFP15018 202 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 F2RP25116 425 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 DDTP30046 118 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 OR3A1P47881 315 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 RPS23P62266 143 aaKnown RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 GAMTQ14353 236 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 COL19A1Q14993 1142 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 TIGITQ495A1 244 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 NUFIP2Q7Z417 695 aaKnown RBP8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 SLC35E3Q7Z769 313 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 BOD1Q96IK1 185 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 DOCK7Q96N67 2140 aa8.86□□□□□ -0.99
SMARCC2-209ENST00000550164 IGSF23A1L1A6 192 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 IGHV3-13P01766 116 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 IGHV3-7P01780 117 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 CRYAAP02489 173 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 NPBWR2P48146 333 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 ERVFC1-1P60608 527 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 PHYHD1Q5SRE7 291 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 C16orf82Q7Z2V1 217 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 OR10S1Q8NGN2 331 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 TAAR9Q96RI9 348 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 ABHD14AQ9BUJ0 271 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 TMEM9BQ9NQ34 198 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 LYRM2Q9NU23 88 aaPredicted RBP8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 PLA2G3Q9NZ20 509 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 KIAA2026Q5HYC2 2103 aa8.85□□□□□ -0.99
SMARCC2-209ENST00000550164 DUXBA0A1W2PPF3 345 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms