RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 APOL3O95236 402 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 IGHV3-7P01780 117 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 OR8U9P0C7N5 309 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 ATP6V1B1P15313 513 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 CRHBPP24387 322 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 CD34P28906 385 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 PRRX1P54821 245 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 GABARAPL2P60520 117 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 ZNF85Q03923 595 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 CCDC58Q4VC31 144 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 ZNF684Q5T5D7 378 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 HEPN1Q6WQI6 88 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 AHSA2Q719I0 299 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 Q8N9W7 124 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 OR52N1Q8NH53 320 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 OR4C12Q96R67 309 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 DUSP21Q9H596 190 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 NUFIP1Q9UHK0 495 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 MRM2Q9UI43 246 aaKnown RBP11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 GNG8Q9UK08 70 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 MYRFQ9Y2G1 1151 aa11.79□□□□□ -0.52
CLSTN3-216ENST00000545663 HSPG2P98160 4391 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 PTGES3LE9PB15 166 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 MYL12BO14950 172 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 RGS10O43665 173 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 IGLV1-51P01701 117 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 CDK1P06493 297 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 VDAC1P21796 283 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 GABRR1P24046 479 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 MAP2K3P46734 347 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 CCR9P51686 369 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 TAS2R43P59537 309 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 BCL2L15Q5TBC7 163 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 LAIR2Q6ISS4 152 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 FDX2Q6P4F2 183 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 LINC00322Q6ZN03 302 aaPredicted RBP11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 LHFPL3Q86UP9 236 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 ZNF573Q86YE8 665 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 TGIF2LXQ8IUE1 241 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 MND1Q9BWT6 205 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 IL36RNQ9UBH0 155 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 POLDIP2Q9Y2S7 368 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 CEPT1Q9Y6K0 416 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 DNAH6Q9C0G6 4158 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 DNAH17Q9UFH2 4485 aa11.78□□□□□ -0.52
CLSTN3-216ENST00000545663 PKD1P98161 4303 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 PQLC2LA1A4F0 135 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 J3QLW9 94 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 HTR1AP08908 422 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 LIMS3P0CW19 117 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 LIMS4P0CW20 117 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 ZNF19P17023 458 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 DUSP1P28562 367 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 EWSR1Q01844 656 aaKnown RBP eCLIP11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 TMEM65Q6PI78 240 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 CEMP1Q6PRD7 247 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 PRSS48Q7RTY5 328 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 LEAP2Q969E1 77 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 EAF1Q96JC9 268 aaPredicted RBP11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 C4orf36Q96KX1 117 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 GPR173Q9NS66 373 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 LIN7CQ9NUP9 197 aaKnown RBP11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 FAM206AQ9NX38 181 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 PLA2G2EQ9NZK7 142 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 OR52A1Q9UKL2 312 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 SLC7A11Q9UPY5 501 aa11.77□□□□□ -0.53
CLSTN3-216ENST00000545663 IGHV4OR15-8A0A075B7B6 117 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 A0A087WW49 117 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 IGHV3-72A0A0B4J1Y9 119 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 DHRS7CA6NNS2 312 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 LINC01619G3V211 115 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 UBCP0CG48 685 aaKnown RBP11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 P2RX3P56373 397 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PRR20EP86478 221 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PRR20CP86479 221 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PRR20DP86480 221 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PRR20BP86481 221 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PRR20AP86496 221 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PITPNAQ00169 270 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 SSX6Q7RTT6 188 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 ELMOD2Q8IZ81 293 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 SVOPQ8N4V2 548 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 RSRP1Q9BUV0 290 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PBOV1Q9GZY1 135 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 OR51J1Q9H342 316 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 GAL3ST2Q9H3Q3 398 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 TPSG1Q9NRR2 321 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PLSCR3Q9NRY6 295 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 BABAM2Q9NXR7 383 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 MTCH1Q9NZJ7 389 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 PIGLQ9Y2B2 252 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 WSB1Q9Y6I7 421 aa11.76□□□□□ -0.53
CLSTN3-216ENST00000545663 A0A1B0GVY2 172 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 TMEM212A6NML5 194 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 G3V318 75 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 RPP14O95059 124 aaKnown RBP11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 TNFAIP8O95379 198 aa11.75□□□□□ -0.53
CLSTN3-216ENST00000545663 NRASP01111 189 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms