RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 KIAA0895LQ68EN5 471 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 CYB5R2Q6BCY4 276 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 TMEM211Q6ICI0 200 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 OR8G2PQ6IF36 304 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 ASCL4Q6XD76 172 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 LYZL2Q7Z4W2 148 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 TMEM144Q7Z5S9 345 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 MARCH3Q86UD3 253 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 D2HGDHQ8N465 521 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 C11orf42Q8N5U0 333 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 LINC01356Q8N9X3 169 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 ZNF738Q8NE65 137 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 OR2M7Q8NG81 312 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 OR4N2Q8NGD1 307 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 OR2AJ1Q8NGZ0 328 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 C16orf52Q8NHV5 167 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 ST8SIA1Q92185 356 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 VN1R1Q9GZP7 353 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 TMEM9BQ9NQ34 198 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 PRTFDC1Q9NRG1 225 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 SERINC1Q9NRX5 453 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 STARD5Q9NSY2 213 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 PLEKHJ1Q9NW61 149 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 IL36GQ9NZH8 169 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 FOXJ2Q9P0K8 574 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 GNG13Q9P2W3 67 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 B3GAT1Q9P2W7 334 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 NPIPA1Q9UND3 350 aa5.77□□□□□ -1.49
USP28-207ENST00000538475 TRAV30A0A087WSZ9 112 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 SAA2-SAA4A0A096LPE2 208 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 TMED7-TICAM2A0A0A6YYA0 188 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 C3orf85A0A1B0GTC6 90 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 A0A1W2PNV4 684 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A10PA6NDY2 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A18PA6NE21 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A16PA6NEW6 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A20PA6NIJ5 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A8PA6NJQ4 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A7PA6NKC0 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 C4orf47A7E2U8 309 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 ZNF850A8MQ14 1090 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A22PA8MWA6 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A12PA8MX19 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A5PA8MXJ8 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A23PA8MXZ1 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 H3BSH0 61 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 HS3ST1O14792 307 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 XRCC2O43543 280 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 TCF21O43680 179 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 SERPINA7P05543 415 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 CTXN2P0C2S0 81 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A15PP0C7V4 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A13PP0C7W8 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A14PP0C7W9 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM90A24PP0C7X0 464 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 MSR1P21757 451 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 NTSR1P30989 418 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 LTBRP36941 435 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 CCR2P41597 374 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 OR3A4PP47883 348 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 CEBPGP53567 150 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 GFRA1P56159 465 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 SLC37A1P57057 533 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 ZNF121P58317 390 aaPredicted RBP5.76□□□□□ -1.49
USP28-207ENST00000538475 RPP30P78346 268 aaKnown RBP5.76□□□□□ -1.49
USP28-207ENST00000538475 NSDHLQ15738 373 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 ADIRFQ15847 76 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 PRSS8Q16651 343 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 POM121L1PQ3SYA9 428 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 NMSQ5H8A3 153 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 FAM78AQ5JUQ0 283 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 C9orf50Q5SZB4 431 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 TPTE2P1Q5T6R2 138 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 ZNF880Q6PDB4 577 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 H1FNTQ75WM6 255 aaPredicted RBP5.76□□□□□ -1.49
USP28-207ENST00000538475 ZNF695Q8IW36 515 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 TCTEX1D1Q8N7M0 179 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 CADM4Q8NFZ8 388 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 OR52M1Q8NGK5 317 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 OR5D13Q8NGL4 314 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 CMTM2Q8TAZ6 248 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 TMEM37Q8WXS4 190 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 ELSPBP1Q96BH3 223 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 NRTNQ99748 197 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 STRADBQ9C0K7 418 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 BANF2Q9H503 90 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 SEPSECSQ9HD40 501 aaKnown RBP5.76□□□□□ -1.49
USP28-207ENST00000538475 CENPMQ9NSP4 180 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 BET1LQ9NYM9 111 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 MRPL27Q9P0M9 148 aaKnown RBP5.76□□□□□ -1.49
USP28-207ENST00000538475 DEC1Q9P2X7 70 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 CCL26Q9Y258 94 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 TRAPPC1Q9Y5R8 145 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 KIAA1549Q9HCM3 1950 aa5.76□□□□□ -1.49
USP28-207ENST00000538475 IGHV2-70DA0A0C4DH43 119 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 CTXND1A0A1B0GTU2 59 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 A0A1W2PQU0 124 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 CEBPZOSA8MTT3 80 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 FAM90A26D6RGX4 464 aa5.75□□□□□ -1.49
USP28-207ENST00000538475 C11orf98E9PRG8 122 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms