RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 TMEM222Q9H0R3 208 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 UBE2J1Q9Y385 318 aaPredicted RBP13.22□□□□□ -0.29
SNX13-204ENST00000444712 OOEPA6NGQ2 149 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 SRRM5B3KS81 715 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 ATP6V1G2-DDX39BF2Z307 99 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 CCKARP32238 428 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 S100A10P60903 97 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 SP6Q3SY56 376 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 TRAT1Q6PIZ9 186 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 ZNF818PQ6ZRF7 136 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 RELL2Q8NC24 303 aaPredicted RBP13.22□□□□□ -0.29
SNX13-204ENST00000444712 ST8SIA2Q92186 375 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 CNTNAP3BQ96NU0 1288 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 AQP10Q96PS8 301 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 CNTNAP3Q9BZ76 1288 aa13.22□□□□□ -0.29
SNX13-204ENST00000444712 A0A1B0GW55 424 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 WNT9BO14905 357 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 HSPA12AO43301 675 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 WNT2P09544 360 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 DUX4L2P0CJ85 424 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 DUX4L3P0CJ86 424 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 DUX4L4P0CJ87 422 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 DUX4L5P0CJ88 424 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 DUX4L6P0CJ89 424 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 DUX4L7P0CJ90 424 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 TNFSF4P23510 183 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 LUMP51884 338 aaPredicted RBP13.21□□□□□ -0.29
SNX13-204ENST00000444712 PAX5Q02548 391 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 C6orf183Q5T699 404 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 OR10V1Q8NGI7 309 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 PPP1R35Q8TAP8 253 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 IL1F10Q8WWZ1 152 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 AKR1E2Q96JD6 320 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 TMEM56Q96MV1 263 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 SPIN2AQ99865 258 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 SPIN2BQ9BPZ2 258 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 DUX4Q9UBX2 424 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 SH3BGRL2Q9UJC5 107 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 AUP1Q9Y679 476 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 TMEM56-RWDD3S4R434 201 aa13.21□□□□□ -0.29
SNX13-204ENST00000444712 ZSCAN5BA6NJL1 495 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 SPDEFO95238 335 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 KLRB1Q12918 225 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 MSMPQ1L6U9 139 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 LRP11Q86VZ4 500 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 BVESQ8NE79 360 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 IL22RA2Q969J5 263 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 MEGF10Q96KG7 1140 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 TP53RKQ96S44 253 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 ZNF471Q9BX82 626 aaPredicted RBP13.2□□□□□ -0.3
SNX13-204ENST00000444712 DNTTIP1Q9H147 329 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 NGBQ9NPG2 151 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 ZDHHC8Q9ULC8 765 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 FRYQ5TBA9 3013 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 IGKV1D-13A0A0B4J2D9 117 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 ANKRD34BA5PLL1 514 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 H0Y980 276 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 H0YIZ8 118 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.2□□□□□ -0.3
SNX13-204ENST00000444712 PSPNO60542 156 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 CDS2O95674 445 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 IGKV1-13P0DP09 117 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 GATA4P43694 442 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 PRR30Q53SZ7 412 aaPredicted RBP13.2□□□□□ -0.3
SNX13-204ENST00000444712 ZNF695Q8IW36 515 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 ERGIC1Q969X5 290 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 OR2V2Q96R30 315 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 TAF9BQ9HBM6 251 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 CCL28Q9NRJ3 127 aa13.2□□□□□ -0.3
SNX13-204ENST00000444712 PRR14LQ5THK1 2151 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 F5H0A9 414 aaPredicted RBP13.19□□□□□ -0.3
SNX13-204ENST00000444712 C3orf80F5H4A9 247 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 HSD17B6O14756 317 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 DEDDO75618 318 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 UCP1P25874 307 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 CEBPDP49716 269 aaPredicted RBP13.19□□□□□ -0.3
SNX13-204ENST00000444712 TMEM268Q5VZI3 342 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 ALKAL2Q6UX46 152 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 LYZL2Q7Z4W2 148 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 OR1S1Q8NH92 325 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 GALMQ96C23 342 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 SLC25A32Q9H2D1 315 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 OR5AC2Q9NZP5 309 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 IL19Q9UHD0 177 aa13.19□□□□□ -0.3
SNX13-204ENST00000444712 ERRFI1Q9UJM3 462 aaPredicted RBP13.19□□□□□ -0.3
SNX13-204ENST00000444712 TAAR5O14804 337 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 EIF5AP63241 154 aaKnown RBP13.18□□□□□ -0.3
SNX13-204ENST00000444712 COL10A1Q03692 680 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 MEX3BQ6ZN04 569 aaKnown RBP13.18□□□□□ -0.3
SNX13-204ENST00000444712 SLC35G3Q8N808 338 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 OR5D13Q8NGL4 314 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 STOML3Q8TAV4 291 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 DMRTA2Q96SC8 542 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 DIRC2Q96SL1 478 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 MRPL37Q9BZE1 423 aaKnown RBP13.18□□□□□ -0.3
SNX13-204ENST00000444712 PLEKHA2Q9HB19 425 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 VSTM5A8MXK1 200 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 HEXAP06865 529 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 TPT1P13693 172 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms