RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 NSD1Q96L73 2696 aaPredicted RBP18.52■□□□□ 0.56
LINC01116-201ENST00000295549 TRAV18A0A075B6X5 111 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 ORC5O43913 435 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 ELK1P19419 428 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 C17orf58Q2M2W7 97 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 C6orf183Q5T699 404 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 HACD4Q5VWC8 232 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 ZNF880Q6PDB4 577 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 TRAT1Q6PIZ9 186 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 HEPN1Q6WQI6 88 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 ZNF554Q86TJ5 538 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 TNFRSF14Q92956 283 aa18.52■□□□□ 0.56
LINC01116-201ENST00000295549 TRAV39A0A0B4J263 110 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 NPIPB11E5RHQ5 1161 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 CTDSP2O14595 271 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 CD3GP09693 182 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 IGHV1-8P0DP01 117 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 RCC1P18754 421 aaPredicted RBP18.51■□□□□ 0.55
LINC01116-201ENST00000295549 HNF1AP20823 631 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 MRPS15P82914 257 aaKnown RBP18.51■□□□□ 0.55
LINC01116-201ENST00000295549 PNLIPRP3Q17RR3 467 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 NANPQ8TBE9 248 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 HDHD3Q9BSH5 251 aaPredicted RBP18.51■□□□□ 0.55
LINC01116-201ENST00000295549 CALYQ9NYX4 217 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 A3GALT2U3KPV4 340 aa18.51■□□□□ 0.55
LINC01116-201ENST00000295549 C15orf65H3BRN8 121 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 CLPXO76031 633 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 FSHBP01225 129 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 MELTFP08582 738 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 ERVFRD-1P60508 538 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 MOB1BQ7L9L4 216 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 MCFD2Q8NI22 146 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 CHMP1AQ9HD42 196 aaPredicted RBP18.5■□□□□ 0.55
LINC01116-201ENST00000295549 SIRT7Q9NRC8 400 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 CDC42EP3Q9UKI2 254 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 KIAA2026Q5HYC2 2103 aa18.5■□□□□ 0.55
LINC01116-201ENST00000295549 TMEM235A6NFC5 223 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 INAFM1C9JVW0 142 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 RGS5O15539 181 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 PITPNAQ00169 270 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 TMEM69Q5SWH9 247 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 NCR3LG1Q68D85 454 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 OR10A7Q8NGE5 316 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 C6orf62Q9GZU0 229 aaPredicted RBP18.49■□□□□ 0.55
LINC01116-201ENST00000295549 MIXL1Q9H2W2 232 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 MMP27Q9H306 513 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 AUNIPQ9H7T9 357 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 HEXA-AS1Q9H8Q6 139 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 KCNIP1Q9NZI2 227 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 ELF5Q9UKW6 265 aaPredicted RBP18.49■□□□□ 0.55
LINC01116-201ENST00000295549 MGAT4AQ9UM21 535 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 FAM25AB3EWG3 89 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 FAM25CB3EWG5 89 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 FAM25GB3EWG6 89 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 C12orf77C9JDV5 145 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 SSTR5P35346 364 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 ARFRP1Q13795 201 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 KLF17Q5JT82 389 aaPredicted RBP18.49■□□□□ 0.55
LINC01116-201ENST00000295549 Q6ZPA2 131 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 ARL11Q969Q4 196 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 BEX2Q9BXY8 128 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 RAB9BQ9NP90 201 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 ADAM30Q9UKF2 790 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 SESN1Q9Y6P5 492 aa18.49■□□□□ 0.55
LINC01116-201ENST00000295549 NAV3Q8IVL0 2385 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 CENPVL3A0A0U1RRI6 287 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 SPINT2O43291 252 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 MMP23AO75900 390 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 HOXB4P17483 251 aaPredicted RBP18.48■□□□□ 0.55
LINC01116-201ENST00000295549 OMGP23515 440 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 MNDAP41218 407 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 PRAMEF5Q5TYX0 476 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 OR52W1Q6IF63 320 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 ZNF782Q6ZMW2 699 aaPredicted RBP18.48■□□□□ 0.55
LINC01116-201ENST00000295549 LAX1Q8IWV1 398 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 IZUMO1Q8IYV9 350 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 RFESDQ8TAC1 157 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 LHX4Q969G2 390 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 KIRREL1Q96J84 757 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 TAF9BQ9HBM6 251 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 Q9N2K0 584 aa18.48■□□□□ 0.55
LINC01116-201ENST00000295549 FN1P02751 2386 aaKnown RBP18.47■□□□□ 0.55
LINC01116-201ENST00000295549 RNASEK-C17orf49H0YIS7 233 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 TPPPO94811 219 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 FCGR3AP08637 254 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 DTYMKP23919 212 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 TALDO1P37837 337 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 DLX1P56177 255 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 TAS2R20P59543 309 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 GNG2P59768 71 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 BPIFB3P59826 476 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 GUCA2AQ02747 115 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 SRSF7Q16629 238 aaKnown RBP eCLIP18.47■□□□□ 0.55
LINC01116-201ENST00000295549 GPR157Q5UAW9 335 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 IDI2-AS1Q9NZ38 188 aa18.47■□□□□ 0.55
LINC01116-201ENST00000295549 TRAV40A0A0B4J280 105 aa18.46■□□□□ 0.55
LINC01116-201ENST00000295549 F2RL2O00254 374 aa18.46■□□□□ 0.55
LINC01116-201ENST00000295549 HLA-DQB1P01920 261 aa18.46■□□□□ 0.55
LINC01116-201ENST00000295549 HBZP02008 142 aa18.46■□□□□ 0.55
LINC01116-201ENST00000295549 IGHV4-38-2P0DP08 117 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms